ENST00000588944.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000588944.1 |
Source |
Gencode19 |
Same with |
NONHSAT070059 |
Classification |
intergenic |
Length |
919 nt |
Genomic location |
chr2+:35056445..35385344 |
Exon number |
3 |
Exons |
35056445..35056559,35384150..35384221,35384613..35385344 |
Genome context |
|
Sequence |
000001 TGTGTCATGC AGCTGCTATG GGGGGATGGA GGAGGAGTGG CATTGGCAAT TCAAGACTGC CTTTCCTACC CTTTTCAGTG 000080
000081 CCTCTTTCAG TGATACGAAG CTAAAACCAG ATACTGCTTT CATAGTACTT TTCTGACCAC GGTTTTCTGG AGTTTTTTCG 000160 000161 TATGGAGTTT GTAAGCTTCC TGACATGGAT TATAACTGTA CTTGATGGAG CACAGTTATA ATAGCTGCTT TAGAGTCCTT 000240 000241 GATAATTCCC ACATCTGAGT CATCTCAAGG TTGGTTTCAA TTAACTTTGA GAAATGGCTA CTTTTCCCTT TCCCTCTTCT 000320 000321 CACATTGTCC TAATTCTTTG TGTGTTAATA ACTTTAGGTG GTATCTCAAA CATTTTGAAT ACTAAATTGT GAGATTCTAG 000400 000401 GTCTTGTTAA AAATCTCTGA AGAATACTAA CTTTTTGTTT CATTCTGTTT AGTCTTGTTT TAGCAGACAA TTAATCCAGG 000480 000481 TGGTTTTAGA CCACAGTTTT GTCTTCTTTC TGTGGACAGC AGTACTAGCA CCAATTCAGT TTTCAAAACC TATTCTGCGC 000560 000561 TAATTTAGGT TTGCTCCATG CACGTAGCAC TGTTGGGACT TTGAGCAGTG GTTTATATGA TTGTTTATTT TTCATGTATT 000640 000641 TGCTATGCTG ATGTAGTTAT AGCCTGCAAG TGTTGGACAT ATCCTGAGCA TGAGAGCTTG GCCATTTCAT ACACAGATTT 000720 000721 AGGGGATGTT TTATCTTCAG TTCTCTTTTA TAAGGAACAC TCTTCATACT CTGTCTTATG AGGTCCCTTT ACCTCTTCTC 000800 000801 TCACAACAAA CTGTGGGTTT TTCTTGGAGC TTCAGTTTTC TATGCTGCTA TGGCAGCTGC AACTTCAAAA TGCTTACCTG 000880 000881 CCTCTAGGGC CAAACTATAA GAGAATAAAA AAGAAAAAA |
Predicted Small Protein
Name | ENST00000588944.1_smProtein_725:886 |
Length | 54 |
Molecular weight | 6214.2568 |
Aromaticity | 0.207547169811 |
Instability index | 40.1681132075 |
Isoelectric point | 7.66925048828 |
Runs | 10 |
Runs residual | 0.0284169351127 |
Runs probability | 0.0470676558912 |
Amino acid sequence | MFYLQFSFIRNTLHTLSYEVPLPLLSQQTVGFSWSFSFLCCYGSCNFKMLTCL |
Secondary structure | LEEEEEEEHHHHHLLLEEEELLLLLLLLEEEEEEEEEEEEEELLLLEEEEEEL |
PRMN | - |
PiMo | - |