ENST00000588145.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000588145.1 |
Source |
Gencode19 |
Same with |
NONHSAT068890 |
Classification |
intergenic |
Length |
790 nt |
Genomic location |
chr2-:6777912..6789370 |
Exon number |
5 |
Exons |
6777912..6778285,6778410..6778493,6778849..6778929,6779183..6779405,6789343..6789370 |
Genome context |
|
Sequence |
000001 GGAGGAAGAA GGAAGGAACG AGAGAGAGGT TTCCAGAAGT TCCCCAGTCA TTGAGCATTT CTGAGGCTCT TGATGCATAT 000080
000081 GCCAAGTAGT TATGGAGAAA GACACAGCAG CTTACCTCTG CAGGCATCAT TGTGTGAAAG GAAGACCCAG GCTCTCTCAC 000160 000161 CACCCTTGAA CAGAAGCCTT TTGCTAAGGT GATAGCTACA TGTCCAAGCC TATTGCGTGG CATGCATTTT GCCTTCTGCA 000240 000241 GCCCACTAAA GGAGTTTGCA GTTCACCCGC AAACCTCAGC GATCCAAGCT CCCCTGGATG ACCATCACTC ACCAAGAAAA 000320 000321 GAGCAATAAC AGGACCTGTT TTGCTAATCC AGGACTGTTC TCCAGCACTA ACTCTAAATA ATCCCTTCTG CTAGAGTCCA 000400 000401 CTTTCTGGAA CCTGTTGCCT CCGTTTTCAA CGTTTCCCAA ACTTGGTCCG TTGTGTGAGC TGGCTGATAA AAGTTCCAGG 000480 000481 TAACCTTCCT TGTTCTCAAG GTCCATTTTC CAGGAAAATC TGAGTCATGG TGCTGGGGAG GACACTTAAG TACATCAGTC 000560 000561 AATCAGATGA TTATTAAATT TAGGAAATAG TAGATCAACT GGATTAACTG GATTAAAATG CAGAATCCCA GGCCCCAGCC 000640 000641 CAGACCTACT GAACCAGCAT CTGCTCTTTA ACAAGAGCCC CATGTGATGT GTGGGACAGA AAACTTTGTG AAGCACAGGG 000720 000721 CTAGACAGTC TCTAAAGTCT TCTGCAGATC AGAAACGCAG CAATTCTGAG GTTTTCTTCA ATTTTCTAAT |
Predicted Small Protein
Name | ENST00000588145.1_smProtein_221:328 |
Length | 36 |
Molecular weight | 4001.4655 |
Aromaticity | 0.0857142857143 |
Instability index | 59.3314285714 |
Isoelectric point | 6.36993408203 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.00346228581522 |
Amino acid sequence | MHFAFCSPLKEFAVHPQTSAIQAPLDDHHSPRKEQ |
Secondary structure | LLEEELLLHHHHLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |