ENST00000586645.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000586645.1 |
Source |
Gencode19 |
Same with |
lnc-ZNF506-1:1 |
Classification |
intergenic |
Length |
1357 nt |
Genomic location |
chr19-:19868175..19887202 |
Exon number |
3 |
Exons |
19868175..19869355,19873347..19873455,19887136..19887202 |
Genome context |
|
Sequence |
000001 ACTGCTGGCC GCCGATTCTA CGCCGCCCGG TCGCCAGGGA GAGTGAATAC AGCTAGGGAC GTGAAAGAAC GGGGAAGATA 000080
000081 ACCGAAGGGT GGTTTGAGAA ACCCACCAGG CCAACTGGGA ATTAGAATTG ATTCAAAACT CCATTGATCG CCTGACCTCC 000160 000161 ATAAGCTCCT ACTCTGATGC TTCTTAGAGA CAAGGCCTCA CTCCATTGCC CCTAGGCCAG GCCTGGTGAG TGACAGCAGC 000240 000241 CCTGGTGCCC CAGCCTGCTA GGGCAATGTG TCACCCAGAG GCTTCAAGGC CCTTCTCACC ATGGTACCCA CCTCCTCGAA 000320 000321 GCTGCCTCCC AAAGCCCTCT AGCTGCTGCT GCAGCCACAA CAAGTGCCAC CACCAGGGGC CTTCCAGCTG CCAGTGCAGG 000400 000401 CTTTCCAGAG CCGGGGACTG GGGAACCTGC AGTCATCACC TCAGCAATTC TGGTGGCAGC CAGGCCAGCC AGGGCAGCGA 000480 000481 TGATGACCGT AATGAAAAGT GGGATGACAG CTCCACACTG GTGGATGAGT TGAGAACACC AGGCAGAGGC ATGTACCTGG 000560 000561 TCTTTGATGG TTCAGTGGAC CTGCACTACC ATTGCAGTGC AAAGTGCAAG AGTTGAAGCT TGGAAACCTT CACCTAGATT 000640 000641 TAGGAAGATT CATGGAAAAG TCTGGATGTC CACGCAGAAG CCTGCTGCAC GAGTGGAACC CTCATGGAGA ATCTCTACCA 000720 000721 GGGCAGTGTG GAGGGGAAAT GTGGGGTTGG AGCCCCCACA CAGAGTCCCA CTGGAGGACT TCCTAGTGGA GCTATGAGAA 000800 000801 GAGAACCACT GTCCTCCTGA CATCATAATG GTAGATCCAC TGGCAGCTTG CACTCTCAGC CTGAAAAAGC TACAAGTACT 000880 000881 CAAGGCCAGC CCTTGAGAGC ATCTACAGGT GCTAAACCCT GGAAAGCCAC AAGTGTGGTG CTGCCCAAGG CTTTGGGAGC 000960 000961 CCACCCCTTG TACCAGCACG CCCTTGATGT GGGATAGGAG GTCAAAGGAA GTTATTTTGG AGCTTTAAGA TTTAATGACT 001040 001041 GCTCTGCTTG GTTTTGGACT TGTGTAGGCT TGTAGCCCCT TTCTTTTGGC CAATTTCTTC CTTTTAGAAT GGGAATGTTG 001120 001121 ATCCAATGCC TATACCCCCA TTGTATCTTG GAAGTAACAA ACTTGTTTCT TATTTTACAG GGTCATAGGC AGAAGGGACT 001200 001201 AGCCTTGTCT CAGATAAGAC TTTGGACTGT GGACTTTTGA GTTAATGCTG GAATGAGTTA AATATTTGCA GGACTGTTGA 001280 001281 GAAGGCATGG TAGTTTGTTT GTTTGTTTGT TTGTTTGTTT GTTTGTTTGT TTTTTGAGAC AGAGTCTCCC TCTGTCA |
Predicted Small Protein
Name | ENST00000586645.1_smProtein_566:796 |
Length | 77 |
Molecular weight | 8807.1642 |
Aromaticity | 0.0921052631579 |
Instability index | 41.5105263158 |
Isoelectric point | 10.8408813477 |
Runs | 14 |
Runs residual | 0.0428009679371 |
Runs probability | 0.0365281247634 |
Amino acid sequence | MVQWTCTTIAVQSARVEAWKPSPRFRKIHGKVWMSTQKPAARVEPSWRISTRAVWRGNVG LEPPHRVPLEDFLVEL |
Secondary structure | LLEEEEEEEEEEEEEEEEELLLLLLEEEELEEEELLLLLLLEEELLLEEEEEEEEELLLL LLLLLLLLHHHHEEEL |
PRMN | - |
PiMo | - |