ENST00000586625.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000586625.1 |
Source |
Gencode19 |
Same with |
NONHSAT131539 |
Classification |
intergenic |
Length |
775 nt |
Genomic location |
chr9-:66513488..66525124 |
Exon number |
3 |
Exons |
66513488..66514007,66522791..66522934,66525014..66525124 |
Genome context |
|
Sequence |
000001 GAGTAGGGCT GATTGGAGCC ATTGTACAGT GTCGGGAACA TACCAGGACA CTGAGAATAG TGTCATGTCA TAAGGACCCA 000080
000081 GAGCAGATGG ACCCTGCTGT GATGCACAAA GGGATGAAAT GGGATTTTGT TGGCACCAAG ACCTGATTGC TTTGCCAGTT 000160 000161 ACCCTCACCC CTGGCTCACA AGGAAAGTGT ATGGAGGAGA TTCTCGAGGA ACCACATGAG TTTTAATATC ATAAGCTTCT 000240 000241 GCCCTGAATT GAAAGGAGCT GGGCTGCTTG GATCAGAGGT TCCATGGTCT GAACTACTCC ACTCTGGTGA AGGTTTCTTC 000320 000321 CCCAAAGCCA CTCCTCAAGC TGACTTATAT TGTACCTGAG TTGCATGCCT GTGCTCCAAG AGCAGACGTC CTTCCGCAGG 000400 000401 AGCAGGTCAT TAAGAGTCAC TGCGTTGATC ATGTAGAAGA GCTGTTTGAA TACCTGCAGG ATGATCTCAG GGTCCAAGCC 000480 000481 CTGGTCACAC ATGACTGTAT GAAAGGCATT CATCTGGCGG ATGATAGCTT CCAGGCGGTA TGAGTTATCC CCATCTGCCA 000560 000561 TGCTGGAGGA GTGCTTCTGG GAGCCAGTGG GCTTCACACC AGATAGACCC TGAATGCTGT CATTTTCCAA CATGGCAGAA 000640 000641 ACTATCATCG GCTGTAACAC ACCCTCGGCA ATTTTAAAGA GCTGCTGGTA GATCTGAATG GAAAGGTCGC TCAGTACCTG 000720 000721 ACGGTATTCG GTGAGGTCAA AGTTCTTAAG GCAGTGTTCG TTGTGCTTTG CTGTA |
Predicted Small Protein
Name | ENST00000586625.1_smProtein_215:358 |
Length | 48 |
Molecular weight | 5089.7716 |
Aromaticity | 0.127659574468 |
Instability index | 54.2638297872 |
Isoelectric point | 4.57110595703 |
Runs | 7 |
Runs residual | 0.0173404255319 |
Runs probability | 0.0341055341056 |
Amino acid sequence | MSFNIISFCPELKGAGLLGSEVPWSELLHSGEGFFPKATPQADLYCT |
Secondary structure | LLEEEEEELLLLLLLLLLLLLLLHHHHHLLLLLLLLLLLLLLLEEEL |
PRMN | - |
PiMo | - |