ENST00000586235.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000586235.1 |
Source |
Gencode19 |
Same with |
NONHSAT068530 |
Classification |
intergenic |
Length |
879 nt |
Genomic location |
chr2-:308833..314367 |
Exon number |
3 |
Exons |
308833..309407,310215..310393,314243..314367 |
Genome context |
|
Sequence |
000001 GGCCACTGAG GCCTCCCCGT TCGCCTCCCA GAGGCCGCCA CTTTCTTCAG GGCTATCAGA TGAAGGCAGC AACGAAAACA 000080
000081 CCACCACAAG ACCAACTTCA GGCTGGAGCT GATGATGCCA CACAGGGGCT TCCTGGAGCT CCTGCAACCC CAGGCATTAG 000160 000161 TTCCGGTGCA GTTCTAGGAT CAGATCAATT CACTCGACAA CAAGAGAAAC AAATGGAGAT TCCTACACAA AGACTTTCAA 000240 000241 GCACAAAGAA ATCCTGCTGC CTGTAAAGCG GAGCTGCCTC AGCCCTTGAT GAACGACAGA AAATACCACC TACTGCCAGA 000320 000321 CCTCAACGCC TCACAAAACT CTCACCCACC TACTGCTTTT AGCTCACATT CCAGGAATTC AGATGAAGTG AAGTGCTCTC 000400 000401 ATGGGGACCA GGCATGGTTA TGCCAGTCCA CTGCCCTGCA AGCCTCAAGG GAAGCCAACT GCCCTTCAGC AAGTCACACC 000480 000481 TGCCTTGGTG GAGGCCTTGA TTGGAAGTGC CACACGCTAC ATGTCCAGTC CTGAGCGGGA GAATCGGTGT AGGGACGTTC 000560 000561 TGGGGATGCC AGCTGTGGCC AGATCAGGTC CAACTACAGA AGAATAATGA AGACTCCACC TGAGGGCTGG AAAAACAAAA 000640 000641 CCTCAAGTGT GAGGCAGCCA ACCTGTTACC TCGAGGGACT GTTCCGCAGC ACAGCGGGGC CATGGGAACA GCAGCAGACA 000720 000721 CCCCGACCTC CTCGCTACCT GTGTGTGTAT TAACACGCCG GCCTCCTCGC TACCTGTGTG TGTATTAACA CGCCGGCCTC 000800 000801 CTCGCTCCCT GTGTGTGTAT TAACACCCCG GCCTCCTCGC TCCCTGTGTG TGTATTAACA CGCCGGCCTC CTCGCTACC |
Predicted Small Protein
Name | ENST00000586235.1_smProtein_59:265 |
Length | 69 |
Molecular weight | 7073.8877 |
Aromaticity | 0.0147058823529 |
Instability index | 49.7455882353 |
Isoelectric point | 7.78057861328 |
Runs | 9 |
Runs residual | 0.00814785373609 |
Runs probability | 0.0251820447899 |
Amino acid sequence | MKAATKTPPQDQLQAGADDATQGLPGAPATPGISSGAVLGSDQFTRQQEKQMEIPTQRLS STKKSCCL |
Secondary structure | LLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLLLEEELLLLEEHHHHHHEELLLLLLL LLLLLLLL |
PRMN | - |
PiMo | - |