ENST00000585327.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000585327.1 |
Source |
Gencode19 |
Same with |
NONHSAT033469 |
Classification |
intergenic |
Length |
467 nt |
Genomic location |
chr13+:44482850..44600977 |
Exon number |
4 |
Exons |
44482850..44482912,44516559..44516749,44596611..44596804,44600959..44600977 |
Genome context |
|
Sequence |
000001 AGTCTTACTG TTTTCCATCA AGGTGTCACC AATCTTCCAG TCTCCCAGGC AGAAGTTTTT GAGAGCTTCA ACCAGCACTA 000080
000081 CTACTTGAGG ACCTATGCAG TGTTTGTCCA TGAGCATGGA ATGACTCATA CTGGCCTCAG AGTTAGGGAC TCACTTTAAA 000160 000161 GGAAAGGGGA TGCAGTAGTG GGCACATGAC TAAGAAATCC ACCGATCCTC TCATATACTG CACCACCAGA AGCTGCTGGA 000240 000241 TTAGCAGAGC AAAGGCAAAG ATTGACCAGA CCAAGCCCTG AGACACAGTG TTGAGAGCCA AGACATAAAG TTGTGAAGAT 000320 000321 TCAGACCCAG AGCCCAGCAG GGCACAGGCT GGAGGGGTGA TGTGAGTGAT CAGTAACACC ATGAAGACTC TGCTCCTGGG 000400 000401 TCAGGAATGC TTTTTTGTCC CTGTTTTTGG ATTTTCCACC ATGATCAGCC AATGCAGAAA GAAATCT |
Predicted Small Protein
Name | ENST00000585327.1_smProtein_185:280 |
Length | 32 |
Molecular weight | 3572.1851 |
Aromaticity | 0.0645161290323 |
Instability index | 52.635483871 |
Isoelectric point | 9.78472900391 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0394629924042 |
Amino acid sequence | MTKKSTDPLIYCTTRSCWISRAKAKIDQTKP |
Secondary structure | LLLLLLLLEEELLLLLLHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |