ENST00000585303.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000585303.1

Source

Gencode19

Same with

lnc-AC005323.1.1-1:6,NONHSAT145625

Classification

intergenic

Length

566 nt

Genomic location

chr17+:10515225..10526172

Exon number

5

Exons

10515225..10515262,10515776..10515891,10517062..10517194,10524892..10525066,10526069..10526172

Genome context

Sequence
000001 GTTGGAGTAT TGGGAGGCCG AGGCAGGCGG ATCATGAGAT ATTTTGTGCT GTTTTAGACT GCTCTTTCTT CCATTAAATG 000080
000081 AGAGATTAGA TCTGAATGGC CACGTGATCT TCTGAGTCCC ATCTGTAAGA ATCTGCATTT CCACGGAATT GGGGGAGCAA 000160
000161 ACGTTCTCAA AACATTCTTA AATGCAAACC CGCAGGCACA GCATGTGTCT GTCAACTCCA AGAGCATTTG GATGTTCGAA 000240
000241 GGGAGAGGAT GTTTGACATC TAACCCGTCG TGGAAAGAGG AGCCTCTTAA GGAACCGGAA ACCTGGAGAG TGAGATGCCA 000320
000321 AAGATTATGA AAGAAACTGG AAGGAAAGTG AAGACTGGAA CAGAGATTTT CTCATTCCTG CTTGAGTGTT CTTCCAATGA 000400
000401 CTGTGTGTGT GTAGCTTTGA AAATACAAAG TATTGGGAAT AGGAACTGTG ATACAAACAA AGACAGTGAC ATGAAGGCAA 000480
000481 TGGATTCTCA GCATTACAAG GCAAGACAGA ACTTGAAGGA AGAAGGCTGG GAGGAAACCA ATGTTGAATG AACACTGACT 000560
000561 CTGTGC
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Predicted Small Protein

Name ENST00000585303.1_smProtein_314:550
Length 79
Molecular weight 8904.0231
Aromaticity 0.0512820512821
Instability index 48.4692307692
Isoelectric point 5.82855224609
Runs 14
Runs residual 0.0458098811757
Runs probability 0.0332916950564
Amino acid sequence MPKIMKETGRKVKTGTEIFSFLLECSSNDCVCVALKIQSIGNRNCDTNKDSDMKAMDSQH
YKARQNLKEEGWEETNVE
Secondary structure LLLHHHHLLLLLLLLHHHHHHEEEELLLLEEEEEEEEEELLLLLLLLLLLLHHHHHLHHH
HHHHHHHHHLLLEELLLL
PRMN -
PiMo -