ENST00000584683.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000584683.1

Source

Gencode19

Same with

lnc-COX10-4:1,NONHSAT145767

Classification

intronic(S)

Length

2140 nt

Genomic location

chr17+:14230652..14232791

Exon number

1

Exons

14230652..14232791

Genome context

Sequence
000001 ATTTATTAGT CTGAACAGAT GTTGATTACT GGCCACCAGA GGTAAAGCAT CCCAAGTTCA ATGGGGGGAG ATGGGCTCAG 000080
000081 AGTTTGCTGT GATCCACAGG TAAAATAAGG AACTCTGATC TTATCACATT TGTTGTGTGT TTTTGCTTAG CATTTAAGTT 000160
000161 CAAGACTTTT ATGGGTATAG CCACTTAATG TCATTGCGTC ACTTAATGTA ATGGGTGTGA TGATACATGT ATGTGTCATC 000240
000241 TTTGGACATC TTTGGACATC AGGATACTGG GACCATCACC CTTTTGAATC CTGGCCCCAC CTGTTTATTA TTCCAAGTTG 000320
000321 CCCTTGATTC ACCCCTGAGT TTCTTGACAT ATTTGCATCA TGACCTCCAG TCATTAGCTT TAAGCCTTGC TAGTTGATTC 000400
000401 ATTTTCTTTC ATTCATTTAT TTGTTCATTC AACAAATATT TTCAAGTGCT TGCGATGCCT GGTGTTTTGC TGTTTTTCTT 000480
000481 GTATTTTTTT AAAGATAGTC TTTAAAACTC ACAGTCTAAA CAAATACGAG ACAAAACATG GAAGGCAATA AGCTGCAATT 000560
000561 AAAGATTTTG TTTTTGGAAA TGGTCATTAG GCTTAAAAAT AGTCACAGGG TCAGTTTTTC ACGAAGCCAA TGCAGGGTAA 000640
000641 AAGGCTAATC TCACTTGTAA TTCTTAGCAG CTCTCTCACT GATGGTTTAG TTACTTAATC TCCTTGGTGT TTACTGTGTC 000720
000721 GTTCCTTACG GGTGAAGAAT GGGAGATGAA CGGGAATGCT TTGTCTAAAG CACAGAAGAG TTGCTGGAAA TTTTAAGACT 000800
000801 CACCAGTCAG GCAACATCAT CTATCAAAAA GTTCTCATAG AATGTAACAA ATAATCATGG AACCTACTCA AATAATGCAG 000880
000881 AACCTTTGTC CATAGCTTCA GGCCTCCAAT GCTTTCCTTC TCTCTTTGGA TGTGAAATGC ACAAGGCAGG TTGGACTCTG 000960
000961 TATACTGATC TGTTGCAAAG GTATCGGGCT TTTAGAATAA ATGGTTGACC ATGACAATGA AAAGATGAGA ATGTAGGGAG 001040
001041 GTTGGGCTTA CTTTTCTCCT GCTGAAAGTT GATTCCGGGT AGCATCTGAA CTTCACAAGC TGAGAATTCC AATAAATCCA 001120
001121 CAAAAAGAAT TCCCCTAGGG AAGGGGGTGT GGACTTTAAT TGATGATGTC CAATTAGAGT TTCCATTGAC ATTGCCATGT 001200
001201 CTCTTGTTTT CTTGAGACAT CTCTTGGTCA CCCTCAAGCA TATGTACAAG CCAGTTAGGA AGAAGTAAGT ACTGATGACA 001280
001281 AGAAGGAGTG TGAGATGAGA AACAGTAGCC TTTTCTTTGT CTGTAGCATC TCAAGTTTTA TAGTCTCTGG GATCTTCTCT 001360
001361 CTGATTAGAA AGTGCTTCTT TTCCACCTGG CAAGGTGGCA CACACCTGTA ATCCCAACAC TTTGAGAGGC TGTGCTGGGT 001440
001441 GGATTGCTTG GGCCCAGAAG TTTAAGACCA GCCTGGGAAA CATGGCAAAA CCCTGTCTCT ACAAAATAAA ATAAAATAAT 001520
001521 GCAAAAAAAG AGAGAGCAAC TGCTTCATTG CTTTTCTAAA ACGTTGTTGA GCTATTTAAA GCCTATGATA ACGGGGGTTT 001600
001601 ATTTGCACTT ACTTCCCTTC ATTTTAGTTG AATTCAAGCT TATGTCTTCA GATTTTTATT GACTTAGTTA CCTTATACTG 001680
001681 TTTTTAGTGG ATTGCCGTGA AGTAGGGTTC TGTTGGTTGA GCACAAGGGA AGCAGAGAGC TGGATGGAGC CATTATCTCA 001760
001761 GACTTAAGTC AAGCGCTGAT TGAAATTTCT CTTGTCCCAA ACTCCTAGTG GTCCTGCACT CAGGAGATAG GGAAGGTCGC 001840
001841 TGACGATACT GAGTCTTTTC CACAGTGCTT GCTTCTTTTT AGCAGCCTCA GATGGATCCC TGCCCCTAAA CTGGGGCTGT 001920
001921 TTCTCTCCTT CTCAACCTAA TTGTGTGCCA TGAGGAAATA AAGAAAGAAA GAGAGAAAGA GAGAAAGAAA GAAAGAAAGA 002000
002001 AAGAAAGAAA GAAAGAAAGA AAGAAAGAAA GAAAAGGAAG GAAGGAAGGA AGGAAGGAGA GGAAGGAAGG AAAAGAGAGA 002080
002081 AAGAGAGAGA GGAAGGAAGG AAGGAAAGGA AGGGAGGGAG GGAGAGAGAG AGAAAGAAAG
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Predicted Small Protein

Name ENST00000584683.1_smProtein_755:853
Length 33
Molecular weight 3743.4328
Aromaticity 0.0625
Instability index 75.925
Isoelectric point 9.89874267578
Runs 5
Runs residual 0.0353954081633
Runs probability 0.00363893305069
Amino acid sequence MLCLKHRRVAGNFKTHQSGNIIYQKVLIECNK
Secondary structure LLLLLLLLLLLLLLLLLLLLEEEHHHHEELLL
PRMN -
PiMo -