ENST00000584683.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000584683.1 |
Source |
Gencode19 |
Same with |
lnc-COX10-4:1,NONHSAT145767 |
Classification |
intronic(S) |
Length |
2140 nt |
Genomic location |
chr17+:14230652..14232791 |
Exon number |
1 |
Exons |
14230652..14232791 |
Genome context |
|
Sequence |
000001 ATTTATTAGT CTGAACAGAT GTTGATTACT GGCCACCAGA GGTAAAGCAT CCCAAGTTCA ATGGGGGGAG ATGGGCTCAG 000080
000081 AGTTTGCTGT GATCCACAGG TAAAATAAGG AACTCTGATC TTATCACATT TGTTGTGTGT TTTTGCTTAG CATTTAAGTT 000160 000161 CAAGACTTTT ATGGGTATAG CCACTTAATG TCATTGCGTC ACTTAATGTA ATGGGTGTGA TGATACATGT ATGTGTCATC 000240 000241 TTTGGACATC TTTGGACATC AGGATACTGG GACCATCACC CTTTTGAATC CTGGCCCCAC CTGTTTATTA TTCCAAGTTG 000320 000321 CCCTTGATTC ACCCCTGAGT TTCTTGACAT ATTTGCATCA TGACCTCCAG TCATTAGCTT TAAGCCTTGC TAGTTGATTC 000400 000401 ATTTTCTTTC ATTCATTTAT TTGTTCATTC AACAAATATT TTCAAGTGCT TGCGATGCCT GGTGTTTTGC TGTTTTTCTT 000480 000481 GTATTTTTTT AAAGATAGTC TTTAAAACTC ACAGTCTAAA CAAATACGAG ACAAAACATG GAAGGCAATA AGCTGCAATT 000560 000561 AAAGATTTTG TTTTTGGAAA TGGTCATTAG GCTTAAAAAT AGTCACAGGG TCAGTTTTTC ACGAAGCCAA TGCAGGGTAA 000640 000641 AAGGCTAATC TCACTTGTAA TTCTTAGCAG CTCTCTCACT GATGGTTTAG TTACTTAATC TCCTTGGTGT TTACTGTGTC 000720 000721 GTTCCTTACG GGTGAAGAAT GGGAGATGAA CGGGAATGCT TTGTCTAAAG CACAGAAGAG TTGCTGGAAA TTTTAAGACT 000800 000801 CACCAGTCAG GCAACATCAT CTATCAAAAA GTTCTCATAG AATGTAACAA ATAATCATGG AACCTACTCA AATAATGCAG 000880 000881 AACCTTTGTC CATAGCTTCA GGCCTCCAAT GCTTTCCTTC TCTCTTTGGA TGTGAAATGC ACAAGGCAGG TTGGACTCTG 000960 000961 TATACTGATC TGTTGCAAAG GTATCGGGCT TTTAGAATAA ATGGTTGACC ATGACAATGA AAAGATGAGA ATGTAGGGAG 001040 001041 GTTGGGCTTA CTTTTCTCCT GCTGAAAGTT GATTCCGGGT AGCATCTGAA CTTCACAAGC TGAGAATTCC AATAAATCCA 001120 001121 CAAAAAGAAT TCCCCTAGGG AAGGGGGTGT GGACTTTAAT TGATGATGTC CAATTAGAGT TTCCATTGAC ATTGCCATGT 001200 001201 CTCTTGTTTT CTTGAGACAT CTCTTGGTCA CCCTCAAGCA TATGTACAAG CCAGTTAGGA AGAAGTAAGT ACTGATGACA 001280 001281 AGAAGGAGTG TGAGATGAGA AACAGTAGCC TTTTCTTTGT CTGTAGCATC TCAAGTTTTA TAGTCTCTGG GATCTTCTCT 001360 001361 CTGATTAGAA AGTGCTTCTT TTCCACCTGG CAAGGTGGCA CACACCTGTA ATCCCAACAC TTTGAGAGGC TGTGCTGGGT 001440 001441 GGATTGCTTG GGCCCAGAAG TTTAAGACCA GCCTGGGAAA CATGGCAAAA CCCTGTCTCT ACAAAATAAA ATAAAATAAT 001520 001521 GCAAAAAAAG AGAGAGCAAC TGCTTCATTG CTTTTCTAAA ACGTTGTTGA GCTATTTAAA GCCTATGATA ACGGGGGTTT 001600 001601 ATTTGCACTT ACTTCCCTTC ATTTTAGTTG AATTCAAGCT TATGTCTTCA GATTTTTATT GACTTAGTTA CCTTATACTG 001680 001681 TTTTTAGTGG ATTGCCGTGA AGTAGGGTTC TGTTGGTTGA GCACAAGGGA AGCAGAGAGC TGGATGGAGC CATTATCTCA 001760 001761 GACTTAAGTC AAGCGCTGAT TGAAATTTCT CTTGTCCCAA ACTCCTAGTG GTCCTGCACT CAGGAGATAG GGAAGGTCGC 001840 001841 TGACGATACT GAGTCTTTTC CACAGTGCTT GCTTCTTTTT AGCAGCCTCA GATGGATCCC TGCCCCTAAA CTGGGGCTGT 001920 001921 TTCTCTCCTT CTCAACCTAA TTGTGTGCCA TGAGGAAATA AAGAAAGAAA GAGAGAAAGA GAGAAAGAAA GAAAGAAAGA 002000 002001 AAGAAAGAAA GAAAGAAAGA AAGAAAGAAA GAAAAGGAAG GAAGGAAGGA AGGAAGGAGA GGAAGGAAGG AAAAGAGAGA 002080 002081 AAGAGAGAGA GGAAGGAAGG AAGGAAAGGA AGGGAGGGAG GGAGAGAGAG AGAAAGAAAG |
Predicted Small Protein
Name | ENST00000584683.1_smProtein_755:853 |
Length | 33 |
Molecular weight | 3743.4328 |
Aromaticity | 0.0625 |
Instability index | 75.925 |
Isoelectric point | 9.89874267578 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.00363893305069 |
Amino acid sequence | MLCLKHRRVAGNFKTHQSGNIIYQKVLIECNK |
Secondary structure | LLLLLLLLLLLLLLLLLLLLEEEHHHHEELLL |
PRMN | - |
PiMo | - |