ENST00000584012.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000584012.1 |
Source |
Gencode19 |
Same with |
lnc-FOXK2-1:1,NONHSAT056720 |
Classification |
intronic(S) |
Length |
769 nt |
Genomic location |
chr17+:80439974..80441264 |
Exon number |
2 |
Exons |
80439974..80440658,80441181..80441264 |
Genome context |
|
Sequence |
000001 AAGACTTTGT TAAAATTCTG GCGGAACTGT TTTAATTGGT CTCTGAAAAC AGGTCCCTGC AGGTATTTAG ATCAGTGGTA 000080
000081 GATGAGGCAG AGAGGTCAGC TCTCAGGGAC AATCTTTAAG GGCGCCAATG TCCCTCACAG GCCCCTGACT TGAAATTCTA 000160 000161 GCACGCAGAC GCCTCTGGAA AGGTCCCCAC CCCATAGGCA CAGGCTCCCT GTGGGGTGAT GTGGCAGGGG TGTTGAAGGA 000240 000241 TGAGGGATAG AAGGGTCCTC AGCACGGCCA TCCTTCACTC TCAGAGGAAG GGCCCAGGGG CCATCTGCTT ACGTTGACAA 000320 000321 AATAAAACAT GCGCGGTGGG CTGTCAGAAG AACCATGTCC AGCCATCTTT TTTCTGAGTG CAGATTTATA GGAAATTACG 000400 000401 CTATTTTCTT ACCTGTGTTT CCAGCCATCT CACAGCATCT AATGTGATGC CACAGCCATA GTTTTAGAGG CTCAGTTTTT 000480 000481 CTATTAAGGG TTTTTTCAGG CATCCTCATG TAAAAGGAAA TACAGAAAGT GGTTCTCACT TTCAGTTGAT CTCATTGCAG 000560 000561 AATAAACAAT TGTCATATAA ATGTAGCTGG GTACAATGGC TCAGACCTCT AATTCCAGCC ACTCAGGAGG CTATGGCTGG 000640 000641 AGGATCACTT GAGCCCAGGA GTTTGAGACC TTGCTGGGCA ACACAGTGAG ACTCCATCTC AAAAAAAAAA AAATGCAACC 000720 000721 AGTGTATATT TCATCATCCT ATCTCTGTGA GCTTGTTATA CACAAAAGT |
Predicted Small Protein
Name | ENST00000584012.1_smProtein_239:316 |
Length | 26 |
Molecular weight | 2835.362 |
Aromaticity | 0.0 |
Instability index | 50.504 |
Isoelectric point | 11.8297729492 |
Runs | 5 |
Runs residual | 0.00830188679245 |
Runs probability | 0.0210740151917 |
Amino acid sequence | MRDRRVLSTAILHSQRKGPGAICLR |
Secondary structure | LLLHHHHHHHHHHHHLLLLLLEELL |
PRMN | - |
PiMo | - |