ENST00000582755.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000582755.1 |
Source |
Gencode19 |
Same with |
lnc-ZNF516-2:1,NONHSAT059918 |
Classification |
intergenic |
Length |
594 nt |
Genomic location |
chr18-:73939945..73945342 |
Exon number |
3 |
Exons |
73939945..73940010,73940858..73940958,73944916..73945342 |
Genome context |
|
Sequence |
000001 ATAAAGACAT GATCATCTGG AAACATCTGC AAGAAAATCT ACCAAAATGA AGACACACTC ACAAAATGAC CTTCCTCCTA 000080
000081 CATCCCAGCT CTTGTCATCT TAAAGGCATT CACTCCATGG AGGCCCCAGG AGGCGAATGG CTTCTCTCAT CTTGGGCTGC 000160 000161 AGCTTTGCTG ATGACTTCTG GCTCCTCATG GAAAACAGAA GTGCAGGGCA TGCTTTTCCA TTAAGCTCTT TCTGCTAAAG 000240 000241 CAGATTCGAA GTTAAGAGAA GCAGGCACTG CTCATTCTTG TCCAACATTC ATGGACAAAG AACTCTGGGC TTCAGTCTTG 000320 000321 TCAACCCTCG TGCAGGGCTC TGCTCATTAG CAGGAATCTT CAGATGACTC ATATTCCTGG GCATTTGATC TTTTGTGATA 000400 000401 AGAAGAACCA GCCTGGCTCA CTGACTGAGT GAACACTTCA GTGGTCTGTA GTCCCTCAGT TGCACTGGAC ACAGTTGAGG 000480 000481 CCCTCAGGAG CCACGCGGGG TCAGCGGTGG TGGCATTGGG CAGAGCAGCT CACCGAGTTC CAGAAGCTGC ATGCCACCCA 000560 000561 TTCCGAGTCT GTGACCCTCC ACAGCCTGGC CCAC |
Predicted Small Protein
Name | ENST00000582755.1_smProtein_65:223 |
Length | 53 |
Molecular weight | 5700.5705 |
Aromaticity | 0.0961538461538 |
Instability index | 40.2711538462 |
Isoelectric point | 6.37103271484 |
Runs | 9 |
Runs residual | 0.0227075184702 |
Runs probability | 0.0349565251526 |
Amino acid sequence | MTFLLHPSSCHLKGIHSMEAPGGEWLLSSWAAALLMTSGSSWKTEVQGMLFH |
Secondary structure | LEEEELLLLLLLLLLEEELLLLHHHHHHHHHHHHHHHLLLLHHHHHHHHHLL |
PRMN | - |
PiMo | - |