ENST00000581844.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000581844.1 |
Source |
Gencode19 |
Same with |
lnc-TMX3-2:1,NONHSAT059731 |
Classification |
intergenic |
Length |
496 nt |
Genomic location |
chr18-:65925576..65932064 |
Exon number |
5 |
Exons |
65925576..65925802,65927518..65927611,65928862..65928907,65930736..65930840,65932041..65932064 |
Genome context |
|
Sequence |
000001 AAGGTTCTCA AAGAGATGGC CCAGCCTAGG TGTATGAGGT GTGGGGGAGG AAAGCACAGG CATCCCTGAG AAGCCTGTTG 000080
000081 GAGAATCAGC ATCCTCAGGG GAGATTCGAG TTTCAATCGG AGCAAGAAGC ATCCCAGAGG CACTTTAACC AAACCCTGGA 000160 000161 GAGAGAAGAA ATAAGTATAT TACTGTGTCG TCTTTGCACA GCAAGAACTT AGCATCATCC TCTTGTATTT TGGATTTTGT 000240 000241 TTCCTATTTC CTCAGTTTAA TCTTCTCAGC CATAGGTCAT AAAGATGGCG ATGGTTATTT CCTTCCTCAT ACCCATGGTT 000320 000321 TGTTACAATG TGACTTTGCG GTTCTTCCCA TCAGTAAACA GAAGCCATTT TCTTACTCCT TGCCTCTGGA TGGGCCTTGT 000400 000401 GGCTTGCTTT GAGCAATAGA ACGCATCAGA AGGTGACCTC ATGCCAGTTT CATGCCTTGG CTTCAGGAGG CCTTGAATTC 000480 000481 TCTGCTGCTC CTTAGG |
Predicted Small Protein
Name | ENST00000581844.1_smProtein_284:418 |
Length | 45 |
Molecular weight | 5114.1898 |
Aromaticity | 0.159090909091 |
Instability index | 56.8318181818 |
Isoelectric point | 7.75408935547 |
Runs | 9 |
Runs residual | 0.0414438502674 |
Runs probability | 0.0468213311352 |
Amino acid sequence | MAMVISFLIPMVCYNVTLRFFPSVNRSHFLTPCLWMGLVACFEQ |
Secondary structure | LEEEEEEEEEEEEELEEEEEELLLLLLLLLLHHHHHLLEEEEEL |
PRMN | HHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHHHLL |
PiMo | TTTTTTTTTTTTTTTTTTiiiiiiTTTTTTTTTTTTTTTTTToo |