ENST00000581172.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000581172.1 |
Source |
Gencode19 |
Same with |
lnc-LPIN2-1:1,NONHSAT056946 |
Classification |
intergenic |
Length |
667 nt |
Genomic location |
chr18-:2822353..2833063 |
Exon number |
2 |
Exons |
2822353..2822569,2832614..2833063 |
Genome context |
|
Sequence |
000001 GTCAGCCTTC CGAGTAGCTG GGACTACAGG CACCTGCCAC CATGCCCGGC TAATTTTTTT GTATTTTTAG TAGAGACGGG 000080
000081 GTTTCACCGT GTTAGCCAGA ATGGTCTCGA TCTCCTGACC TCATGATCCA CTGCCTCGGC CTCCCAAAGT GCTGGGATTA 000160 000161 CAGGCGTGAA CCACAGCGCC CGGCCAAGAT TAACATTCGA GTCAGTGGGC TGGGGAAGGC AGATCCACCC TTAATCTGGT 000240 000241 GGGCACAATC TAATCAGCTG CTGGCAATTA AAGCACGCTG AAAAACGTGA AAAGGAGAGA CAGGCCCAGC CTCCCAGCCT 000320 000321 ACATCTTCCT CCTGTCCTGG ATGCTTCCTG GCCTCGAACA TCGGACTCCA AGTCCTTCAA TTTTGAGACT CAGACTGGCT 000400 000401 CTCCTTGCTC CTCAGCTTGC AGACAGCCTA CTGTGAGACC TTGTGATCAT AGAGAAGATC TCACCATATT GCCCGGGCTG 000480 000481 GTCTTGAATT CTTGGGTTCA AGTGATCCTC CTGCCTCAGC CTCCCAAAGT GGTGGGATTA TAGGTGTGAG CCACCACACC 000560 000561 CAGCCCATAA TGGCAGGTTA TACATGGCAT AATGTATAAT GGCATATAAT GGAATAATGC CATAATGCCA TAAAGGCAGG 000640 000641 TTATACATTA GCAACATGGA CTTCCAC |
Predicted Small Protein
Name | ENST00000581172.1_smProtein_122:280 |
Length | 53 |
Molecular weight | 6010.0772 |
Aromaticity | 0.0769230769231 |
Instability index | 56.4538461538 |
Isoelectric point | 10.1923217773 |
Runs | 7 |
Runs residual | 0.0157540199913 |
Runs probability | 0.0226739344386 |
Amino acid sequence | MIHCLGLPKCWDYRREPQRPAKINIRVSGLGKADPPLIWWAQSNQLLAIKAR |
Secondary structure | LEELLLLLLLLLLLLLLLLLLEEEEEELLLLLLLLHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |