ENST00000579113.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000579113.1 |
Source |
Gencode19 |
Same with |
lnc-AP001496.1-4:1,NONHSAT057075 |
Classification |
intergenic |
Length |
471 nt |
Genomic location |
chr18+:5310395..5317663 |
Exon number |
2 |
Exons |
5310395..5310451,5317250..5317663 |
Genome context |
|
Sequence |
000001 AAGCATGCAT AGGAGTTTCA CATGGCTAGA TGCAATGAAC CTGGAGATTT TCCCAAGAAT GAGCCTTTCA ATCATAGAGA 000080
000081 GACTGAAAGA CTGAGACTGC ATTTATTTCA GAAAGTGATT GGTGCAGAGG TATGATGATA TATTTTCAGT GTGTCTATCA 000160 000161 AGAAGGTGGT GTTGAAATAT CTGTGGCAAT ATTGGCAAGG AGTCAGTCTC TTGCTATTTC ACAATGGCCT TAATCCTAGT 000240 000241 GATGGCAATT TCTTCTTGCA ACAAAGAAAG ACAGTGACAC CAAAGGAGAA ATATTCAAAG TGGGATGAAA GGGGTTGACA 000320 000321 TTAGAAAAGA CTTCATGGTG ATTGGAAAAA AATGGAAAAA GATTTTGAAA GCACTCCATC ACAGGGCACA CTACAATCAC 000400 000401 AAACTTCATG CCTTACACAG TTTCCTTTCC TGTCATACTA ACTGTGCTTC TTCAACATCT CCTGGGAACC A |
Predicted Small Protein
Name | ENST00000579113.1_smProtein_131:232 |
Length | 34 |
Molecular weight | 3719.3101 |
Aromaticity | 0.121212121212 |
Instability index | 61.5212121212 |
Isoelectric point | 4.52960205078 |
Runs | 6 |
Runs residual | 0.00230566534914 |
Runs probability | 0.0289259848083 |
Amino acid sequence | MMIYFQCVYQEGGVEISVAILARSQSLAISQWP |
Secondary structure | LEEEEEEEELLLLEEEHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |