ENST00000578443.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000578443.1 |
Source |
Gencode19 |
Same with |
lnc-OSBPL1A-3:1,NONHSAT058685 |
Classification |
antisense |
Length |
564 nt |
Genomic location |
chr18-:21656758..21679284 |
Exon number |
2 |
Exons |
21656758..21657223,21679187..21679284 |
Genome context |
|
Sequence |
000001 ATCTGAGGAC ACAGTGAGAA GCCATCATCT ATGAACCAGG ACATGGTCCT CACTAGACAC CCAATCTTCT GGCACCTGGA 000080
000081 TCTCATGCCT CCAGAACTGC TACCTCAGCT TTATTAAAGG AAGTGAAGCT TGCACTAAGG GAAAGGGAAC ACCCCAGGAG 000160 000161 AGAGCAGCAG GAATGCCAGT AGGAAGGAGC AGATGGGCGA GCGGCTTGGA GGCAGAGTGA AGCAGGGGAC ACACCGGGAC 000240 000241 AAAAGGGTGC AAGCCCAACA GAGGAGTGAA CACCTGCTCC CGGAGAAACG GCATCTCTCA ACGTGACGTC GAAGGGACCA 000320 000321 GGATTATAGA CATGAATGCT AACAATTCTG ACCTCAGGTG AGGAGCTACA GAAATGGATG GTAGAACTGG AAACAAACGT 000400 000401 TAAGAATCCA TCCAATCCTG AGTACGTGGA ACTAAATCAA TAAAACACAA CAGAAACCTC CACGGTGAAA ACCCCACTCT 000480 000481 TCTAGAATAA GAATACAATG AATTCAATCC GTCTTTAATT TTGTGCCTAA GATGGGTGCC AATGTCTGAA GGCACATGTT 000560 000561 AAAG |
Predicted Small Protein
Name | ENST00000578443.1_smProtein_335:442 |
Length | 36 |
Molecular weight | 4078.5744 |
Aromaticity | 0.0571428571429 |
Instability index | 40.0085714286 |
Isoelectric point | 4.20611572266 |
Runs | 7 |
Runs residual | 0.0188861985472 |
Runs probability | 0.038887627123 |
Amino acid sequence | MLTILTSGEELQKWMVELETNVKNPSNPEYVELNQ |
Secondary structure | LEEEELLHHHHHHHHHHHHHLLLLLLLLEEEEELL |
PRMN | - |
PiMo | - |