ENST00000576166.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000576166.1

Source

Gencode19

Same with

lnc-OR3A1-1:3,NONHSAT144999

Classification

overlapping(S)

Length

313 nt

Genomic location

chr17-:3182398..3289587

Exon number

3

Exons

3182398..3182447,3239327..3239420,3289419..3289587

Genome context

Sequence
000001 GGTCGTAGGA CATGGCCGCC AGGAGGTAGC TCTCGGTGAT GCCCAGAGCC ACGAAGAAGT ACATCTCGGC AAAGCACGCC 000080
000081 TGGAAGGATA TGGCCTGGCC CGGGTGGAGC AGGCCGGCCA GCAGCCTGGG GACCGTGACG GTGGTAAAGC AGACGTCCAC 000160
000161 GAGGCTCAGA CATGCCACAA AATGTTGAAT GAAGATAGGC AGCGTTGGCA AGGAGAGTTT CTGAAACTTC CACTGGAGGG 000240
000241 CTCTGCGTGT TCCGGCAGGA ATGGTATTCT GACCTTTTCA GCTAGCAGAG GATGAGGAGG ACAAGGTGGT GGT
[back to top]

Predicted Small Protein

Name ENST00000576166.1_smProtein_38:187
Length 50
Molecular weight 5527.4162
Aromaticity 0.0816326530612
Instability index 46.6163265306
Isoelectric point 11.137512207
Runs 9
Runs residual 0.0216216216216
Runs probability 0.0402461284814
Amino acid sequence MPRATKKYISAKHAWKDMAWPGWSRPASSLGTVTVVKQTSTRLRHATKC
Secondary structure LLLHHHHHHLHHHHHHHLLLLLLLLLLLLLLEEEEEELLLLEEEELLLL
PRMN -
PiMo -