ENST00000573901.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000573901.1 |
Source |
Gencode19 |
Same with |
lnc-OR3A1-1:1,NONHSAT145000 |
Classification |
overlapping(S) |
Length |
387 nt |
Genomic location |
chr17-:3187772..3289633 |
Exon number |
3 |
Exons |
3187772..3187845,3239323..3239420,3289419..3289633 |
Genome context |
|
Sequence |
000001 GTCACCAGCG CGCCGTAGCG CAGGGGCCGG CACGCCGCCG TCGGGCGGTC GTAGGACATG GCCGCCAGGA GGTAGCTCTC 000080
000081 GGTGATGCCC AGAGCCACGA AGAAGTACAT CTCGGCAAAG CACGCCTGGA AGGATATGGC CTGGCCCGGG TGGAGCAGGC 000160 000161 CGGCCAGCAG CCTGGGGACC GTGACGGTGG TAAAGCAGAC GTCCACGAGG CTCAGACATG CCACAAAATG TTGAATGAAG 000240 000241 ATAGGCAGCG TTGGCAAGGA GAGTTTCTGA AACTTCCACT GGAGGGCTCT GCGTGTTCCG GCAGGAATGG TTTGAGAGCC 000320 000321 AGTTTCTGAG TGCCCCAGAG GAGAATGCTG TAGTGAACAC AGCCCTGTAC AGAGAAGACA GCAGCTT |
Predicted Small Protein
Name | ENST00000573901.1_smProtein_227:328 |
Length | 34 |
Molecular weight | 3767.2159 |
Aromaticity | 0.0909090909091 |
Instability index | 53.1848484848 |
Isoelectric point | 7.97711181641 |
Runs | 5 |
Runs residual | 0.0326086956522 |
Runs probability | 0.0298357180711 |
Amino acid sequence | MLNEDRQRWQGEFLKLPLEGSACSGRNGLRASF |
Secondary structure | LLLHHHHHHHHHHHLLLLLLLLLLLLLLEELLL |
PRMN | - |
PiMo | - |