ENST00000572706.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000572706.1 |
Source |
Gencode19 |
Same with |
lnc-PRM1-1:2,NONHSAT140567 |
Classification |
intergenic |
Length |
505 nt |
Genomic location |
chr16-:11438208..11439054 |
Exon number |
2 |
Exons |
11438208..11438627,11438970..11439054 |
Genome context |
|
Sequence |
000001 CTCTTTCAAC GCATCTCAAA ATTTGGCGTG GATGCAGATC ACCTACAGAG TATGATTATT CATCTTTACA TTGCCTTGTT 000080
000081 TTGAGGGTCT CACTCTGTTG CCCAGGATGG AGTGCAGTGG CACAGTGACG GCTCACTACA ACGTTCACCT CCCGGGCATA 000160 000161 GGTGATTCTC CTACCTCAGC CTCCCAAGTA TCTCGGACTA CAGGCGTGCA CCACCACGTC CAGCTAATTT TTGTATTTTT 000240 000241 TGTAGAGACA GGGTCTTACC ATGTTGCCCA AGGTGGTCTG GAACTCCTGG GATCACGCAA TCCTGCCTCC TTGGCCTCCC 000320 000321 AAAGTGCTGG GATTACAGGC GTGAGCCACC ATGCCTGGCC TATTACTGAT ATACAAATAG TGTTTTGTAT ATTGTTTTCA 000400 000401 CTTAATAATG AACATCTTTC TGTATCAGCA AATATCCATC TGCTTCCTCT TGAATGACTG CATAATACTC GATTTGTCTT 000480 000481 ATCACATATT AAACCAATAT CCTAC |
Predicted Small Protein
Name | ENST00000572706.1_smProtein_260:343 |
Length | 28 |
Molecular weight | 3093.6855 |
Aromaticity | 0.111111111111 |
Instability index | 54.5851851852 |
Isoelectric point | 8.36614990234 |
Runs | 5 |
Runs residual | 0.0214707461084 |
Runs probability | 0.036742624978 |
Amino acid sequence | MLPKVVWNSWDHAILPPWPPKVLGLQA |
Secondary structure | LLLLEEELLLLLLLLLLLLHHHLLLLL |
PRMN | - |
PiMo | - |