ENST00000570267.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000570267.1 |
Source |
Gencode19 |
Same with |
lnc-ANKRD11-5:1,NONHSAT144484 |
Classification |
intergenic |
Length |
2424 nt |
Genomic location |
chr16-:89281638..89284061 |
Exon number |
1 |
Exons |
89281638..89284061 |
Genome context |
|
Sequence |
000001 ACTTCCGCCT CCAGCCTCCG GGCCGAAGCT TTGGCCTATG GTGCGGGGAG GTAGTAGTTT CTTCCGCGAG GGTGCGGGAG 000080
000081 GGCCCCGGGG CGCCCTTGGG AACCGGGCTG GAGGCAGAGA CAGGCCCGGA GGACCAGGCG GACGTAAGGA TCAGGCCTCT 000160 000161 GGACGCAACT GCGGAGCCGG AACAGACCAG GAGGGCGCGG TTGGGCGGGT ACAGCCAGGA AGTGCTCGTC GCGAGCGCGG 000240 000241 CCCGCGGTTC GGTCACAGCG AGAAGCCCGC GGGTGCTGGG AGTGCTCGGT CTTCTCTCGA TCTCTGCAGG GAGTCACTGG 000320 000321 CCCCGTTCCT TTTTATCTGT CTGAACATCA CGCCGAACTT TTAACAGTTG ATTCCACTGC ATTTTCAATG TGGTATTTTT 000400 000401 TTTTTCTGTA AATGTTCATC TATTTTTCGC TTCAAATATG CGTTTCTGTT ACTTTTCTAA TGTACCGTAG GAGCCAAGAC 000480 000481 CACCTATACT ACGTTGCAAA ATAGCACTGA TACCAGGGGT TCTCCCAAGG TTCATTCAGA AATGTCACAT GATTCCAGTA 000560 000561 ACAATACGAA AAGGTTTTTT TTTTGGAACC AGGCATATTG ATCCTGGAGT TCACATGGAG GAACAAATGT CTCATAACGC 000640 000641 AGACGACGCG GACAAACAAA AGCGCAATGC CCGACAGATG CGAAAACAGC CTCTGTCATT AAAACTGTGT GCTAGTGACA 000720 000721 CATGAACAGG AAACAAATGG AATATCCAGA CATCAACCCA GTAACATGGA AATTTGGTTC ATAAACATAA TTTCAGAGCG 000800 000801 GTGGAACAAA CATGCAGTTT ATAATGAAAG GTGCTAAGAC AAATGGTTAG CCGTCTGAGA AATGATGAAA TTAATTCTGG 000880 000881 ATCTCACAGG GATAAACTCC AAACGGATCA GGAGTCTAAA TGTGAAAAAC AAAACAAAAC CACATGTGAA GTGTTCACGT 000960 000961 GATTTCGTGG CTGATTAAGA AACAAGATGT GCCCAGGAGG TGGCGGTGGC GCACAAGCTT TGACAGGTTG GAGGGTGAGG 001040 001041 GAGTCTCACG CACCATGAGA TTACCCACAG GCTTCGAATT GGGGGTCACT ACTCAGAAAA GAGAAAAAAA TGAGCGTGGG 001120 001121 CGGGGGGCGC GCAGAGAACT CCCAGAGAAG AAGGAGATCA GACAGGGGGA GGGCTGACGT GACTAGATCA CGTTTCTCAG 001200 001201 CAGCCTGACA GGTGTCTGAG TCACAAAGCT CTGAAGGGCA GCAACGGCTT GCAGTCTTTA GAGCCCCAGG ATTTATCTTA 001280 001281 TCTATGGCTA GCAGAGATTG GACACAATTT CACGAAGTAT ACAAAGCAAC CACATGCTAA ATGGTTCAAC ACTATGAGTG 001360 001361 TTTGGGATGT GTTTTATTTA TTATTTATTA ATTTTGATAC GGAGTCTCCC TCTGTCGTCC AGGCTGGAGT GCAGTGGCAC 001440 001441 GATCTTGGCT CACTGCAACC TCCGCCTCCC AGGTTCCAGC TATTCTCCTG CCTCAGCCTC CCAAGTAGCT GGGATTACAG 001520 001521 GTGCCCACCT TGTAATTTTT AGTAGAGACG GAGTTTCACC ATGTTGGCCA GGCTGGTCTC AAACTTCTCA CTTCAGGTGA 001600 001601 TCCACCCGCC TCGGCCTCCC AAAGTGGTGG GATTACAGAC GTGAGCCACT GCAGCCACCG TGCCTGCCCT TGGGATATGT 001680 001681 TTTTTTTTCT TTTAATTTTG TTTTGTTTTG TTTTTTTGAG ACGAAGTCTT GCTCTGTCGA CCAGGCTGGA GTGCAGGGGC 001760 001761 ACAATCTTGG CTCACCGCAA CCTCCGCCTC CCAGGTTCAA GCGATTCTCC TGCCTCAGCC TCCAGAGTAG CTGGGATTAC 001840 001841 AGGCACGTGC CACCAAGCCC AGCTAATTTT TGTATTTTTA GTAGAGATGG GGTTTCACCA TGTTAGCCAG GATGGTATCT 001920 001921 ATCTCTTGAC CTCGTGATCC TCCTGCCTCA GCCTCCCAGA CTGCTGAGAT TACAGGCGTG AGCCACCGCA CGGATATGTT 002000 002001 TTAAGTAACT GAATGTATTA AAATTTGACT TTGGCACCAG CAGGCTATTG TGAATAATGT TGCTTTGAGC ATCGTGTGCA 002080 002081 AAAATATCCT GGACCCTTGT TCTCAGCACT TTTGGATATA TATGCAAAAG TGGAATGGCT GGGTCACATG ATAATTCTGT 002160 002161 CTGATGTTTT GAGAAACCAC TGTCCTGTTT TCCAGAGCTG CTGCACCATT TTGTATTCCC ATGAGCAGGT GCACAAGGTT 002240 002241 CCAACTTTAC CACATCCAGC CAACAGTTAC CTCCTATTTA ATGGCTAAGA GCCATCACCA CCGGGGTAAT GTGATCTCAC 002320 002321 TGTGGCTTTT GTTTTCATTT CCCTAATGTT TAGTTATGTT GATCATCTTT TCATGTTCTT ATTGGCCATC TGTTATCTTC 002400 002401 TTTATTATAA GTCCTTTTCT GAAT |
Predicted Small Protein
Name | ENST00000570267.1_smProtein_1676:1936 |
Length | 87 |
Molecular weight | 9604.1937 |
Aromaticity | 0.116279069767 |
Instability index | 54.8220930233 |
Isoelectric point | 9.21099853516 |
Runs | 13 |
Runs residual | 0.0115411315515 |
Runs probability | 0.0272852037558 |
Amino acid sequence | MFFFLLILFCFVFLRRSLALSTRLECRGTILAHRNLRLPGSSDSPASASRVAGITGTCHQ AQLIFVFLVEMGFHHVSQDGIYLLTS |
Secondary structure | LHHHHHHHHHHHHHHHHHHHLLLLLLLLEEEELLLLLLLLLLLLLLHHHHHHHHLLHHHH HHHHHHHHHHLLEEEELLLLEEEEEL |
PRMN | HHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHH HHHHHHHHHHHHLLLLLLLLLLLLLL |
PiMo | TTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTT TTTTTTTTTTTToooooooooooooo |