ENST00000569625.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000569625.1 |
Source |
Gencode19 |
Same with |
lnc-PELI2-5:1 |
Classification |
intergenic |
Length |
600 nt |
Genomic location |
chr14+:56382445..56383044 |
Exon number |
1 |
Exons |
56382445..56383044 |
Genome context |
|
Sequence |
000001 GAGAACATGT TGTTTTCCTT GAAGTACTTG TTTCTTCCGT AATTTCATAT CTAATCTCCC AGCTTCACAC ATAACAGATT 000080
000081 TGCTTGACAA TGTCCTAAAG GATGGGGACA GTCTTGGCTT TCACATGAGA AGAGCTAATT AGAACAACTG ATTTTACTTT 000160 000161 GGGAGAAACC AAGTTTCCAG CATGCATCTA GTGATAAATT ATGAAAGCTT TCCTCAGTAC TCCTGCCCTA TGATCCTTCC 000240 000241 CTCACTTCAT TAAGCCTGCT GCATCTTGCA TGGATGGAGG TCACCGATGG CAGAGCAGCT TCTTGGATGA ATTGCAGGGT 000320 000321 CTCCCAACTC TTCAAGCAGC ATCCTCTGTG CTCCCACTCC TGTGCTCATC TCTACTCCTG AACTACAGTG CCATCTTGTC 000400 000401 ATTTGTCTGT TTCAATGTCT GTTTCTCCAA CTGGACAGTA AACCCTTGGA AAAGAAGAAC CAATCTTATT TAAATTTGGT 000480 000481 ATCCTCAGCA ACCAGGACAG TGCCTGGTAC TTTCCAGGTC CTCATTAAAT GTTTTTTGGA TGGATGGATG AATCAATAAA 000560 000561 AGAAAAACTC CAAATGAAAC AGTTGTGGAA ACTAAACAGA |
Predicted Small Protein
Name | ENST00000569625.1_smProtein_269:472 |
Length | 68 |
Molecular weight | 7560.6672 |
Aromaticity | 0.119402985075 |
Instability index | 60.3 |
Isoelectric point | 7.74652099609 |
Runs | 10 |
Runs residual | 0.0059388919278 |
Runs probability | 0.0443914502738 |
Amino acid sequence | MDGGHRWQSSFLDELQGLPTLQAASSVLPLLCSSLLLNYSAILSFVCFNVCFSNWTVNPW KRRTNLI |
Secondary structure | LLLLLLLLHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLHHHEEEEEEEEEEELLEEELLL LLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLL LLLLLLL |
PiMo | oooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTiiiiiiii iiiiiii |