ENST00000569218.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000569218.1 |
Source |
Gencode19 |
Same with |
lnc-ATF7IP2-2:1,NONHSAT140485 |
Classification |
intronic(AS) |
Length |
488 nt |
Genomic location |
chr16+:10127541..10131154 |
Exon number |
2 |
Exons |
10127541..10127716,10130843..10131154 |
Genome context |
|
Sequence |
000001 AGCTATCCAT GCAGTCCGGG AGGGGAGCCA GAGAGAAGCA AGCATGTGCG ACCAGCATTA AAGGGGCAGC TGCAGTCAGT 000080
000081 CCTCTCTGGA GCCCTGTCCT TGTTCTTCCC AACACAGCCT TGTGCGTATG CTGATGCTGC ATGAAATCCC TGCTTCTTCA 000160 000161 TCGTTCGTCA CAAGAGCCCA TGATGCCTTG TCAGATGACA CCTCTGATCC CAGGAGGATC CATGCCGTGG AGACAAACAA 000240 000241 CTCATTATTT GCCTTGATGA CCTGTCATCT CATAGACACC TCCCTGGATG GATGGAGCAC TGGAATTTGG GCTACCAGAG 000320 000321 AGTTCCGCCT CGGTTAGCAG AAGTAATTTG CCCGTGTCCT TATGCAACAT GCTGACCTGG TCGGTCATTT AAATGAAAGG 000400 000401 GCACGGCAGC CATGCAAAAC TCTATCTCCC TAATGCTTTT CTTCCCATTG CTTTCTTCTT CTTGAAATAT AAAAACGACC 000480 000481 CTGTTGTA |
Predicted Small Protein
Name | ENST00000569218.1_smProtein_8:133 |
Length | 42 |
Molecular weight | 4185.9147 |
Aromaticity | 0.0243902439024 |
Instability index | 57.4585365854 |
Isoelectric point | 9.15008544922 |
Runs | 9 |
Runs residual | 0.0435433188688 |
Runs probability | 0.0540834952599 |
Amino acid sequence | MQSGRGAREKQACATSIKGAAAVSPLWSPVLVLPNTALCVC |
Secondary structure | LLLLLLHHHHHHHHHLHHHHHHLLLLLLLEEELLLLEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooo |