ENST00000569218.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000569218.1

Source

Gencode19

Same with

lnc-ATF7IP2-2:1,NONHSAT140485

Classification

intronic(AS)

Length

488 nt

Genomic location

chr16+:10127541..10131154

Exon number

2

Exons

10127541..10127716,10130843..10131154

Genome context

Sequence
000001 AGCTATCCAT GCAGTCCGGG AGGGGAGCCA GAGAGAAGCA AGCATGTGCG ACCAGCATTA AAGGGGCAGC TGCAGTCAGT 000080
000081 CCTCTCTGGA GCCCTGTCCT TGTTCTTCCC AACACAGCCT TGTGCGTATG CTGATGCTGC ATGAAATCCC TGCTTCTTCA 000160
000161 TCGTTCGTCA CAAGAGCCCA TGATGCCTTG TCAGATGACA CCTCTGATCC CAGGAGGATC CATGCCGTGG AGACAAACAA 000240
000241 CTCATTATTT GCCTTGATGA CCTGTCATCT CATAGACACC TCCCTGGATG GATGGAGCAC TGGAATTTGG GCTACCAGAG 000320
000321 AGTTCCGCCT CGGTTAGCAG AAGTAATTTG CCCGTGTCCT TATGCAACAT GCTGACCTGG TCGGTCATTT AAATGAAAGG 000400
000401 GCACGGCAGC CATGCAAAAC TCTATCTCCC TAATGCTTTT CTTCCCATTG CTTTCTTCTT CTTGAAATAT AAAAACGACC 000480
000481 CTGTTGTA
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Predicted Small Protein

Name ENST00000569218.1_smProtein_8:133
Length 42
Molecular weight 4185.9147
Aromaticity 0.0243902439024
Instability index 57.4585365854
Isoelectric point 9.15008544922
Runs 9
Runs residual 0.0435433188688
Runs probability 0.0540834952599
Amino acid sequence MQSGRGAREKQACATSIKGAAAVSPLWSPVLVLPNTALCVC
Secondary structure LLLLLLHHHHHHHHHLHHHHHHLLLLLLLEEELLLLEEEEL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL
PiMo iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooo