ENST00000569164.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000569164.1 |
Source |
Gencode19 |
Same with |
lnc-WWOX-2:13,NONHSAT143875 |
Classification |
intergenic |
Length |
600 nt |
Genomic location |
chr16+:79832490..79841819 |
Exon number |
2 |
Exons |
79832490..79832587,79841318..79841819 |
Genome context |
|
Sequence |
000001 CAATTGTCCT AATAGCCACC ATGGATTGGA TGGATGCTAA CAACAGGCTC ACAGTTCTCC TTCTGTTGCC TCCTTTTATC 000080
000081 CACATGAGAA TCAAACAAGA CTACTGATTA AATGAAGCCT TTGATGAAGT GCATGCAGTT TGTAGCTTGA TTCATGGGAA 000160 000161 TACTCATCAC AGACTGAAAG TGTAACCCAG GGTCTCTGGG TTTTTGGGAA CGCGCTGTGT AAAAGTATCT ACTTGTAACT 000240 000241 GTTACTCCCT GAGTTGTTGT TGTTTTAGAA AGTTCCAAGA AGAAGCTTAG CCTTGGAAAA AACAAAAACT GGTTGAATCC 000320 000321 AGAAGTGGAG ATGAATTTTG GCCAACGCTC CTCACTGCCA CACTAAAAAC CCTGCTCAGA GAGGAGCTTA TTCACCATGT 000400 000401 TCTATTCATG CAATGTGTGT GGAAACATGA TCTACGACAG CATGCGTGCT GCCTTCACCC TACCTCTACA TACAATGACT 000480 000481 CATTTAACCT GCTGAATAAA AGCCCTGTTT TCACCTTTGC TGGGGGAGGT GCCGCTTTGG GAACTATTCG CAGTGTCCTC 000560 000561 TTCACTTTTT GCAAGTAATA GAATACCCTT GTTAAATCCT |
Predicted Small Protein
Name | ENST00000569164.1_smProtein_407:577 |
Length | 57 |
Molecular weight | 6234.1543 |
Aromaticity | 0.125 |
Instability index | 56.0142857143 |
Isoelectric point | 8.88275146484 |
Runs | 10 |
Runs residual | 0.0252732240437 |
Runs probability | 0.0411588058648 |
Amino acid sequence | MQCVWKHDLRQHACCLHPTSTYNDSFNLLNKSPVFTFAGGGAALGTIRSVLFTFCK |
Secondary structure | LEEEEELLLLLLLLLLLLLLLLLLHHHHHLLLLEEEELLLHHHHHHHHHHHEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL |
PiMo | ooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiii |