ENST00000569106.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000569106.1 |
Source |
Gencode19 |
Same with |
lnc-PRR25-2:1,NONHSAT051893 |
Classification |
intergenic |
Length |
530 nt |
Genomic location |
chr16+:933780..935090 |
Exon number |
2 |
Exons |
933780..934161,934943..935090 |
Genome context |
|
Sequence |
000001 TAACCAAATG GTCACATTTT ACTGCATGAC AATATGACAC TATTGATCAC TTTGATTGTA GTTTGATTGA CAAATAATCA 000080
000081 AATTGTCACA AACTGCCTAT AAATGTTAAT TAGATCATGT TGGTTAGTAG TGTTTTTCAG CTCTTTTACA TCCTTCCTTA 000160 000161 TTTTCTATCT ACCTGCTTTA TCTATTATTG AAATCTCCAA CTTTATGGAT TTGTCTATGT CTGCTTACAG TTCTATCCAT 000240 000241 TTTTGCTTCA TGTCTTTTGA AGCTCTATTA TCAGGCGCAT ACGTGTTTGA GAGTCTTCTG ACCTCCTGAT AAACACTGTG 000320 000321 AAATGGCCTC TTTACTCCTG ATCATATTCT TTGCTCTGAA TTCTGCTTTG TCTGGTGTGA AGGTGGAGGG AGAATGATCA 000400 000401 CAGATGGAAA AAAGAGCTCC GGAAATGGTA AGTATATGGA TACACAATGA GGCTGTTCTT CCAATTGAAT GAAATGTCTC 000480 000481 TGAAAGATAA CTGGACTGTT TAATCAAACT GTTTGGCAAT AATAGCAAAA |
Predicted Small Protein
Name | ENST00000569106.1_smProtein_116:190 |
Length | 25 |
Molecular weight | 2958.53 |
Aromaticity | 0.333333333333 |
Instability index | 52.38375 |
Isoelectric point | 5.27191162109 |
Runs | 5 |
Runs residual | 0.0267857142857 |
Runs probability | 0.00102455396573 |
Amino acid sequence | MLVSSVFQLFYILPYFLSTCFIYY |
Secondary structure | LHHHHHHHHHHHHHHHHHHLLEEL |
PRMN | LLHHHHHHHHHHHHHHHHHHHLLL |
PiMo | i??????????????????????? |