ENST00000568144.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000568144.1

Source

Gencode19

Same with

lnc-RSL1D1-2:1,NONHSAT140602

Classification

intronic(S)

Length

1495 nt

Genomic location

chr16-:11974932..11976426

Exon number

1

Exons

11974932..11976426

Genome context

Sequence
000001 CTTGAGTCAT CAGTACCTTC AGATGGAGAT TTTGCTAGAT TTCAGTGAGA ATTTATTTAC CATGCTAACT CCAGGCAGAG 000080
000081 TAAATTAGAA AAAGAATCCA TTATCAAATG TAATATTTAG ACATAATTGG CACCTTACAA ATTGTATTAT CTGGTTTCTT 000160
000161 GATGCCTTGT GCATTGGAGA TGAGAATATA TAGTATCTTC TAAAATGTTT ACATTTTAAA GCCTACTTTT TCCTATTATC 000240
000241 TTTGCAACTT GGAGGCTAAC ATATGAGTGA AAATAATTCT CAGGTTGAGT TCTTAGTTAG TTGTTGCTGC TGTTGTTGTT 000320
000321 TTGAGATGGA GTCTCACCCT GTCGCCAGGC TGGAGTGCAG TGGCACATTC TTGGCTCACT GCAACCTCCG CCTCCCGGGT 000400
000401 AGCTGGGATT ACAGGCATGC ATCACCATAT CTGGCTAATT TTTGTGGTTT TAGTAGAGAC AGGGTTTCAC CTTGTTGGCC 000480
000481 AGGCTGGTCT CGAACTCCTA ACCTCGTGAT TTGCCCGCCT GGGCCTCCCA AAGTGCTGGG ATTACAGGCT TGAGCCACCA 000560
000561 CACCCAGCCC TTACTTACTC AGTTTTGTCT GTAGAGTTGT CCCAAAAATT ATGGAGATGA GCCAGGCATG GTGGCTAACA 000640
000641 CCTAGCACTT TCGAAGTTTG AGGTGGACCG ATTGCTTGAG CCCAGGAGTT GGAGACCACA CTGGGCAACA TAGGGAGACC 000720
000721 CTGTCTCTGT GAAAAATAAA ATTAGCCACT TGTGGTGATA CGTGCCTGTG GTCGTAGCTA TTTGGGAGGT TGAGGCAGGA 000800
000801 GGATTGCTTG AGCCCAGGAA GTCAAGGTTG CTATGATTTA TGAGCTCTGA TCACACCACT GCACTCCAGG CTGGGCAACA 000880
000881 GAACGAGACC TTTACTAAAA AAAAAAAAAA AAAAGCTATG GAAGTGTAAG GCAGCTTGGT GGTTGCAAGG GGCTGAAGGA 000960
000961 GGGAAAGTAA GGAGTGACTG CTTAACGGGT GTAGGATTTC CTTTTTGGGA CAATGAAGTT TTAGAATTAG ATAGTGGTAT 001040
001041 TGATTGTACA ACATGGTGAA TACACTAGAT GGCACTGAAT TGCAAACTAA AATGGTTTAA AAGTTGAATG TTATTACTTA 001120
001121 TATTTTACCA GAATAGAAAA AAGTATGATT CTCTAAACAT AAGTGAAGTT AGTGCCCAGA CATATTTGCA AGTGAGGGGC 001200
001201 CTTAGTAACT AGTATAGAGA AAGTAGCTGT TCTCTGTGGA AGCTATCACT TGATACTAAT CACTAGGCAG GTATAGAATG 001280
001281 TCCTAGAGTT GAGCAAGCCT CAAAAACTCA CTTCAGTTTA GTCCTCCTGA ATCTCAGTGG AACAGAGCTA GAATAGTTTA 001360
001361 AAAGACATAG AGGCAGCTGG TGGGTGGGCC ATGCCTGTAA TCCCAGCACT TTGGGAGGCC AAGGTGGGTG GATCACGAGG 001440
001441 TCAGGAGTTC GAGACCAGCT TGGCCAACAT AGTGAAACCC CGTCTCTACT AAAAA
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Predicted Small Protein

Name ENST00000568144.1_smProtein_416:508
Length 31
Molecular weight 3397.9849
Aromaticity 0.1
Instability index 41.86
Isoelectric point 5.97003173828
Runs 5
Runs residual 0.0355855855856
Runs probability 0.0360007065889
Amino acid sequence MHHHIWLIFVVLVETGFHLVGQAGLELLTS
Secondary structure LLLEEEEEEEEEELLLLLLHHHHHHHHLLL
PRMN LHHHHHHHHHHHHHHHHHHLLLLLLLLLLL
PiMo i?????????????????????????????