ENST00000566957.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000566957.1 |
Source |
Gencode19 |
Same with |
lnc-RP11-276H1.3.1-1:1,NONHSAT140615 |
Classification |
intronic(AS) |
Length |
502 nt |
Genomic location |
chr16-:12187484..12189164 |
Exon number |
2 |
Exons |
12187484..12187748,12188928..12189164 |
Genome context |
|
Sequence |
000001 TTGCAACCTC CAGCTCCCAA ATAACCATAT ATTCAAACGA AATTAACTCA AGAGTAGAAA CTTTGTTGTT AAAAAGGAGG 000080
000081 TGAAGGGAGA CAAGGCTGTT GTAAACACCA ACAAATATCA ACTGAATGAA TTTTGATTAA GATCTAGTAA AGTAGTACCA 000160 000161 GTGAGCTGGT TTCCGCAGCA GTGACGGTAC TTCCGCAGCT ACGGAGTCAG GATCACTTAG TCTGGTGCAT TCCACAGCCT 000240 000241 GGAACACTCT GAAGGAGAGT CGTGAAAGCA AAGGAACTTC TCCCCAGGAA AATCCACGTA TGTGCACAAA CACACAAGCA 000320 000321 CGATTTTGCA CACAATTGCA AGAGGTATCT GAAATCTCTA AAACTATCTA TGAGCCTCCA ATGAGGTTCC CAGATACAAC 000400 000401 AGACACTTCA TATAACTCCC AGGAATCCAC CAAGGGGATA ATATTACCAC CATTTCAAGG ACTGGGAAAA CGAGTTCAGA 000480 000481 GAAATTAAAG CATTTGCCCG GG |
Predicted Small Protein
Name | ENST00000566957.1_smProtein_299:487 |
Length | 63 |
Molecular weight | 7083.9251 |
Aromaticity | 0.0806451612903 |
Instability index | 53.1983870968 |
Isoelectric point | 7.78131103516 |
Runs | 8 |
Runs residual | 0.0246082949309 |
Runs probability | 0.0285064476241 |
Amino acid sequence | MCTNTQARFCTQLQEVSEISKTIYEPPMRFPDTTDTSYNSQESTKGIILPPFQGLGKRVQ RN |
Secondary structure | LLLLHHHHHHHHHHHHHHHHHEEELLLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLEEE EL |
PRMN | - |
PiMo | - |