ENST00000566957.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000566957.1

Source

Gencode19

Same with

lnc-RP11-276H1.3.1-1:1,NONHSAT140615

Classification

intronic(AS)

Length

502 nt

Genomic location

chr16-:12187484..12189164

Exon number

2

Exons

12187484..12187748,12188928..12189164

Genome context

Sequence
000001 TTGCAACCTC CAGCTCCCAA ATAACCATAT ATTCAAACGA AATTAACTCA AGAGTAGAAA CTTTGTTGTT AAAAAGGAGG 000080
000081 TGAAGGGAGA CAAGGCTGTT GTAAACACCA ACAAATATCA ACTGAATGAA TTTTGATTAA GATCTAGTAA AGTAGTACCA 000160
000161 GTGAGCTGGT TTCCGCAGCA GTGACGGTAC TTCCGCAGCT ACGGAGTCAG GATCACTTAG TCTGGTGCAT TCCACAGCCT 000240
000241 GGAACACTCT GAAGGAGAGT CGTGAAAGCA AAGGAACTTC TCCCCAGGAA AATCCACGTA TGTGCACAAA CACACAAGCA 000320
000321 CGATTTTGCA CACAATTGCA AGAGGTATCT GAAATCTCTA AAACTATCTA TGAGCCTCCA ATGAGGTTCC CAGATACAAC 000400
000401 AGACACTTCA TATAACTCCC AGGAATCCAC CAAGGGGATA ATATTACCAC CATTTCAAGG ACTGGGAAAA CGAGTTCAGA 000480
000481 GAAATTAAAG CATTTGCCCG GG
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Predicted Small Protein

Name ENST00000566957.1_smProtein_299:487
Length 63
Molecular weight 7083.9251
Aromaticity 0.0806451612903
Instability index 53.1983870968
Isoelectric point 7.78131103516
Runs 8
Runs residual 0.0246082949309
Runs probability 0.0285064476241
Amino acid sequence MCTNTQARFCTQLQEVSEISKTIYEPPMRFPDTTDTSYNSQESTKGIILPPFQGLGKRVQ
RN
Secondary structure LLLLHHHHHHHHHHHHHHHHHEEELLLLLLLLLLLLLLLLLLLLEEEEELLLLLLLLEEE
EL
PRMN -
PiMo -