ENST00000565783.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000565783.1

Source

Gencode19

Same with

lnc-NSMCE1-3:1,NONHSAT141428

Classification

antisense

Length

499 nt

Genomic location

chr16-:27078249..27079179

Exon number

2

Exons

27078249..27078310,27078743..27079179

Genome context

Sequence
000001 AAAACACCTT TCCTACTTGT TTTGGGAATA TCCACTCTGG GTGCAGCCTG TGTTTGCTGG GCCTGTGTGT TGTTTTCTGG 000080
000081 GAGACTCTGG CTGCTGGAGA GGATTCTCAC AAAGGCATGC ACACCTGGGC AGGCTGCTCC CCCGTGGTGA CCTGCTCACT 000160
000161 GGTTTTCACG TTGCCGCCCG TCTTGTCCTC CTGCACGCTG GTGTGGCTGC TCTGCCTGTT TTGGGCACTG CCATCCAGCC 000240
000241 GGACGCTCTG ACGGCTGCTG GCCTGGGTGG AGGGAAGGCT GGCTGTGGAA GTCAGCAGCC CGCTGCTCAC CTTGTAGGTG 000320
000321 AGGGCACTGC TGCCCAAGCT GATGAAGCTG GCGCTGGACA GGATGCTGCT GCCGCTGCCG CTGCCGGGCA GGCTGGCCTC 000400
000401 ACTCTTTCCC TCCAGTCTGC TTGGTGCTGT GGGCGGGGGG GCCCTGGGAG GCCTCTGAAT GTTGGCTGTG ACCTCTCTGG 000480
000481 GGAGAGGTGA CTCCGTATA
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Predicted Small Protein

Name ENST00000565783.1_smProtein_116:250
Length 45
Molecular weight 4837.8098
Aromaticity 0.113636363636
Instability index 80.2818181818
Isoelectric point 7.69244384766
Runs 5
Runs residual 0.0494652406417
Runs probability 0.127963257375
Amino acid sequence MHTWAGCSPVVTCSLVFTLPPVLSSCTLVWLLCLFWALPSSRTL
Secondary structure LLLLLLLLLEEEEEEEEELLLLLLHHHHHHHHHHHHHLLLLLLL
PRMN LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLL
PiMo ooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTiiiiiii