ENST00000565247.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000565247.1 |
Source |
Gencode19 |
Same with |
lnc-TMEM114-4:1,NONHSAT140373 |
Classification |
intronic(AS) |
Length |
567 nt |
Genomic location |
chr16-:7664232..7664994 |
Exon number |
2 |
Exons |
7664232..7664672,7664869..7664994 |
Genome context |
|
Sequence |
000001 TCTACACCTC CTGAGGATGC TGCGTAGCAA AGCAGTGAAA AAACATGGGG TTGAAACTTA GGAAAAAAGA CCTTTATATA 000080
000081 ATAACCAGAA TTTTTCACAT GGTAGTTCTG TGATTTGGCG AATGAGAGTC GGATATCCAA ACCTCATTCG CTTCCCATAG 000160 000161 CCTGGATGTG AAGCTTCTTG TACAAGGACT ACCTTGACAC CCCCTGCTTT TGGGGGGAGC AGTTCTTGAC AGACTTCCCA 000240 000241 CACACAAGAA AAAGAACCAA TTTACTTCAA AAATGCAGTT TTTAGCACAT AAGCAAGTAC TGATCTTATC TGAAGATCAA 000320 000321 AAAACCCCAC AGGCTTCATC AAAGATGAGT TGCATTCCCT CTGTGGGATC TAGAAGGACG CAGATAAAAA TTAAGGCCAA 000400 000401 ATATGGGCAG GGCTGGAATA AAATCTGATA AGACAGAAGA GGGGAGGAGA GGAGAGAAGC GAAGTGAATT ACAACTAAAA 000480 000481 GGGGAGGCAA AGGTAAACAG ATGTGCAAGA TAAACTCTTT GAAGTGGAAC ATTTCCAGGC TGAAAATCCT TTGCTCGGGG 000560 000561 ACTTAAA |
Predicted Small Protein
Name | ENST00000565247.1_smProtein_272:427 |
Length | 52 |
Molecular weight | 5760.7155 |
Aromaticity | 0.0588235294118 |
Instability index | 69.5 |
Isoelectric point | 10.2272338867 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.031580600208 |
Amino acid sequence | MQFLAHKQVLILSEDQKTPQASSKMSCIPSVGSRRTQIKIKAKYGQGWNKI |
Secondary structure | LLEEELLEEEEEELLLLLLLLLLLLLLLLLLLLLHHHLHHHHHHLLLLLLL |
PRMN | - |
PiMo | - |