ENST00000563846.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000563846.1

Source

Gencode19

Same with

lnc-GANC-1:1,NONHSAT042001

Classification

antisense

Length

823 nt

Genomic location

chr15+:42500611..42519188

Exon number

5

Exons

42500611..42500882,42500962..42501115,42511117..42511151,42516606..42516756,42518978..42519188

Genome context

Sequence
000001 GACCCATAGC TACTCCATCC CGAGTAGCCA TGGGCTTACC ATAGAAGGAA CAAACTCTTA ATCTTAGAAC TGCTTTAGGC 000080
000081 AGTGGGCGTG ATGGTTAAAA ACTCGGCCTT TGGCGTCGAC CTCAGACGGA GATCTACCAA TTAGGAAATT AGCTGTGATT 000160
000161 TAGAAAATTT AATATTTCGA TGCCATACTT TCCTAATCTG CAAAATTTTT GTAAATACCT GTGACCTAGT GTCGTGAGCG 000240
000241 CTTAGCAACA CCTGACACCC ACTAAGCTCT CAGCCAGTGG TTCTGAAAGT GGTTCTAGAC CAGCAACAAC AGCAGTAGCA 000320
000321 GCAGCACCTG TGAACTTGTT AGAAATGCAA AGTTTCAGGC CCATTCCAGT TCTACTGAAT CTGAAACTCG AAGGGAACAG 000400
000401 CAACCTATGT TTTAATAAAC CCCAAGGTAT ATACCCAGTG ACATGAATCC TGGATCATAA GACAGAAACA ATGTGTTACT 000480
000481 ACATTTTTGT TGCTGGGGAA AAGAACTGAC TTGATGTACT TCCTCAGAAG AGAGACCGAA CACCAGGAAA GAAAATACAG 000560
000561 ATTTCCCCAG ACTCTACCTG CTATCACCAT TTTGTTGTAA TACACCTTAA CTCAGAGTAA ACAGAAGAGT CCAAGAACCT 000640
000641 CTGGTTGTTT GCAGATGGTC GCCAGAGAAC CATGATGACA AAGAGGATCA TGGAGAACAG CAAGCGCCAG ATGGCATCGT 000720
000721 CTACCCACAG CTCCCGCCAG TCCTACAATA CAGGGGAGAA GTACAACATT TATACACATT ATCTTAACCC CTTGTTCATA 000800
000801 AAGCCTTTGG CATAGAACAA AAA
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Predicted Small Protein

Name ENST00000563846.1_smProtein_671:814
Length 48
Molecular weight 5568.3501
Aromaticity 0.106382978723
Instability index 62.5489361702
Isoelectric point 9.99395751953
Runs 7
Runs residual 0.0173404255319
Runs probability 0.0285916168269
Amino acid sequence MMTKRIMENSKRQMASSTHSSRQSYNTGEKYNIYTHYLNPLFIKPLA
Secondary structure LLHHHHHHHHHHHHHHLLLLLLLLLLLLLEEEEEEEELLLLEELLLL
PRMN -
PiMo -