ENST00000562716.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000562716.1

Source

Gencode19

Same with

lnc-SH2D7-3:1,NONHSAT047511

Classification

antisense

Length

483 nt

Genomic location

chr15+:78285747..78287631

Exon number

3

Exons

78285747..78285812,78286030..78286176,78287362..78287631

Genome context

Sequence
000001 CTGCTCCTCT GGGGCAGATC TGCAGGGTAC AGAGCAGCAA ACAAGTCCGT GAGAGCATGG CGTCTGGACT GCCCCTTGGA 000080
000081 GTGATGGGGA CTGGGGCCCC CAGGGGCACC TCCCTGGGCC TGTTGTATCT GTTGACTCTT CTGCAAAAAG TAGACAGAGA 000160
000161 AGAGAGCAGG CTGGCCCGCT GTGCTCTACT GTGTCTGTCC CAGGACTCGG AAGTATTACA GTTCCAAAAC GTAACTTGAA 000240
000241 GGTCAGCACA GGAGCTGCTG TGATATAAAA GGAGAGAGTC ACCTGGCGCC CCCTGCAGTC CTCCAGTTGC CCAGCAGCAG 000320
000321 TGGGACGTTC AGTGGCACAC AGTGGGTCTC TGTATGGCCT CCCACCTGCA AGGACTTCCC CGGGCAGGCC CAGCTGCCCA 000400
000401 GAAGCCCCGG AACACACAGG AAGACAACAC TATAGGATGG CAGGTGGGGA TCTGTGCAAT ACAAACATGT AGCTAGAAAA 000480
000481 CCC
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Predicted Small Protein

Name ENST00000562716.1_smProtein_56:238
Length 61
Molecular weight 6435.4737
Aromaticity 0.0333333333333
Instability index 40.9
Isoelectric point 6.03411865234
Runs 7
Runs residual 0.0330673758865
Runs probability 0.0428117192824
Amino acid sequence MASGLPLGVMGTGAPRGTSLGLLYLLTLLQKVDREESRLARCALLCLSQDSEVLQFQNVT
Secondary structure LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLHHHHHHHHHHHHHLLLLLEEEEEELL
PRMN -
PiMo -