ENST00000560054.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000560054.1

Source

Gencode19

Same with

lnc-MEX3B-4:2,NONHSAT047751

Classification

intergenic

Length

569 nt

Genomic location

chr15-:81952823..82090465

Exon number

3

Exons

81952823..81953051,81954341..81954479,82090265..82090465

Genome context

Sequence
000001 GAGGCAATGC CTCGCCCTGC TTCGGCTCGC GCACGGTGCG CGCACCCACT GACCTGCGCC CACTGTCTGG CACTCCCTAG 000080
000081 TGAGATGAAC CCGGTACCTC AGATGGAAAT GCAGAAATCA CCCGTCTTCT GCGTCGCTCA CGCTGGGAGC TGTAGACCGG 000160
000161 AGCTGTTCCT ATTCGGCCAT CTTGGCTCCT CCTCGAAATG GCAACGCATA TGGCTAATAA AACATATTGA GGATGAATGA 000240
000241 GAAAACAACC TGGTTCCTGG AAGGAGAGAA ACAAGGTGGA GTCTTCTCAC AGAAACAAGG AGAAGGTCAG AGAGACCTCC 000320
000321 GGGAGCATCT CATCTTGGAG ACACCACAAG CTCAAGAGGC TGCATTAGCG TTTTTTATTG GAGGCATTTT CTTTTCCTCC 000400
000401 AGATTTTGTT TTTGACTGTT AAGGTCATAG CTACAAACAA TTGATCAAGC CTAAAAGGGC ATTTATAAAC CACCTGCATC 000480
000481 TACATTTTTT TCTTACTGTG GATGGATTTA AAAAGCCGTT TCAAGATGAA ATCTTATGAG TCATTATCAT GTCTTCTGAG 000560
000561 GGCTGAGAT
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Predicted Small Protein

Name ENST00000560054.1_smProtein_236:367
Length 44
Molecular weight 5236.8966
Aromaticity 0.046511627907
Instability index 57.8511627907
Isoelectric point 11.4224243164
Runs 6
Runs residual 0.0177684870656
Runs probability 0.0200936230348
Amino acid sequence MRKQPGSWKERNKVESSHRNKEKVRETSGSISSWRHHKLKRLH
Secondary structure LLLLLLLLLLLLLLLLLLLLHHHEEELLLLLLHHHHHHHHLLL
PRMN -
PiMo -