ENST00000559553.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000559553.1

Source

Gencode19

Same with

lnc-GATM-1:1,NONHSAT042249

Classification

intergenic

Length

729 nt

Genomic location

chr15-:45722850..45734006

Exon number

3

Exons

45722850..45723012,45725811..45726348,45733979..45734006

Genome context

Sequence
000001 AGTCTGGTGG TGAATCGTCC ATAGTCTGGG ACAGGCAGGG GAGCCCAGCG GCATGCTGGA TATGAATGTA TCTTCAGCCT 000080
000081 TCAAGTTACC ATTGGCCAGA GGGAAGAGTG GCCCCAAACT CTGAAGAGCG CTGGCAAGGC TCCCCATCTT CCTCTCCCTA 000160
000161 GCCTCCACAG GAACATCACA GTATGGCTTG GCATTTTTTT TTTTTTTTTG AGACGGAGTC TCACTCTGTC ACCCAGGCTG 000240
000241 GAGTGCAGTG GTGTGATCTC AGCTCACTGC AAGCTCTGCC TCCCGGGTTC ATGCCATTCT CCTGCCTCAG CCTCCCGAGT 000320
000321 AACTGGGACT ACAGGCGCCC GCCACCACGC CCAGCTAATT TTTTGTATTT TTAGTAGAGA CGGGGTTTCA CTGTGTTAGC 000400
000401 CAGGATGGTC TCAATCTCCT GACCTTGTGA TCTGCCCGCC TCAGCCTCCC AAAGTGCTGG GATGACAGGC GTGAGCCACG 000480
000481 CGCCCAGCCT GGCTTGGCAT CTTTAGGGCA GATCTCAGTA TGCCTTGCAT TCCAATTCAT CTCCAGAATC CTACACTTCC 000560
000561 TCCAAGGAGT TGGAAAAAGC TCATGATGAC TTCAGCGAAG AATTGCCAAA TCTAGAAATT AAAAATCCAA AGTATTGATC 000640
000641 GCCTGGTGGG CGCCAAACCG TCCACCGCGC TCCGCAGGCC AACTGCGGGC CGGCGCGTCC GCGTCTCTGC AGATGGGAGA 000720
000721 CTCACCTGG
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Predicted Small Protein

Name ENST00000559553.1_smProtein_182:373
Length 64
Molecular weight 7404.357
Aromaticity 0.222222222222
Instability index 75.7285714286
Isoelectric point 5.97674560547
Runs 7
Runs residual 0.0338516358925
Runs probability 0.0351527998586
Amino acid sequence MAWHFFFFFETESHSVTQAGVQWCDLSSLQALPPGFMPFSCLSLPSNWDYRRPPPRPANF
LYF
Secondary structure LEEEEEEEEELLLLLLLLLLEEEELLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLL
PRMN -
PiMo -