ENST00000559299.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000559299.1 |
Source |
Gencode19 |
Same with |
lnc-MEX3B-2:1,NONHSAT047756 |
Classification |
intergenic |
Length |
526 nt |
Genomic location |
chr15-:82245644..82288007 |
Exon number |
3 |
Exons |
82245644..82245848,82246730..82246810,82287768..82288007 |
Genome context |
|
Sequence |
000001 CCCAGTTCGA GCTTCCCGGC TGCTTTGTTT ACCTAATCAA GCCTGGGCAA TGGCGGGCGC CCCTCCCCCA GCCTCGCTGC 000080
000081 CGCCTTGCAG TTTGATCTCA GACTGCTGTG CTAGCAATCA GCGAGACTCC GTGGGCGTAG GACCCTCCGA GCCAGGTGCC 000160 000161 GGATATAATC TCGTGGTGCG CCGGTTTTTA AGCCGGTCTG AAAAGCGCAA TATTCGGGTG GGAGTGACCG GATTTTCCAG 000240 000241 AGTTTAGGAT GCTTCAAGGG AAAGATGAAC CGGGGAACCG CCACCGTGAC TATTTCTCAT CTACATATCC ACCCCCCGAA 000320 000321 GTTCTTAAGG TGGAGCGGAA TTCATTTTAT TTGCAAATGT GGAAGGCATT ATAAAAACCG TGAATGATGC CCCCTCCCAT 000400 000401 GAGGGATACA GGGAGAGCCA CGTGAAGAGG ATGTTGGGCT TCTTCAAGCT GGCAGGGCAC TGAGCTGACT GTCCACCACA 000480 000481 CTCACCAGGG GCCTTTGTGC ATCCCGTGGG GCAGCTCTGG GAAAGG |
Predicted Small Protein
Name | ENST00000559299.1_smProtein_248:373 |
Length | 42 |
Molecular weight | 4929.5476 |
Aromaticity | 0.146341463415 |
Instability index | 59.0734146341 |
Isoelectric point | 8.12017822266 |
Runs | 6 |
Runs residual | 0.0296274128385 |
Runs probability | 0.0282046752634 |
Amino acid sequence | MLQGKDEPGNRHRDYFSSTYPPPEVLKVERNSFYLQMWKAL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLHHHEEELLLHHHHHHHHHL |
PRMN | - |
PiMo | - |