ENST00000557019.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000557019.1 |
Source |
Gencode19 |
Same with |
lnc-SEC23A-1:4,NONHSAT036501 |
Classification |
intergenic |
Length |
584 nt |
Genomic location |
chr14-:39308050..39417410 |
Exon number |
4 |
Exons |
39308050..39308408,39410558..39410577,39410724..39410899,39417382..39417410 |
Genome context |
|
Sequence |
000001 CTCTTCAGCC TACTCAGTGT GAAGATGATT GCTGCCCTCA GCTGTGCCTG GAGCACAGGG CACCTCCAGT TCGGCCTCTC 000080
000081 CAGAAGTAAA CTTGTCTTCT GCCTATCTTG TGTTTGTTGG GAGGAGGTGA CCTGGGACTC TACTACTATT GATGAAGAAT 000160 000161 CCGAAAAAGT CTTCTATTAG CCCTGTGCCA CACCCTACCT ATGAGGCTTT TGGGAAGAAG CAGAGAAATC AGTGTTTACT 000240 000241 GCAGAGAACA CAGAAGCCAG CAAGCAGCAG GGAAGGGAGG CGAACCAATG CAGCAGCCCA CCGGGACCGA GGAGGACACA 000320 000321 CGCAGAGCAA GTCACAGGAA GCGCAGCTGA AAACAAATGG ACGCTTATCC CAAATGCACA GGACACTTAC CAAGAACTGA 000400 000401 TGGTCCGTCA AAGTAAAGCT CAACAGCTTT GGCTGGCAGG ACAGTCAAAC TTTTGGACGA CAGAAAGTAA CAGTGGGAAA 000480 000481 TGGGACAACA TCTGCCAGCA ACGCGAGAGG CCAAGACCAT GGCTGCTACA GGAGGGGTCA GCGTCACAGT ACACGCATGG 000560 000561 CGGCGGTTGC ACATGCATGC CTGG |
Predicted Small Protein
Name | ENST00000557019.1_smProtein_200:349 |
Length | 50 |
Molecular weight | 5626.2147 |
Aromaticity | 0.0204081632653 |
Instability index | 80.3571428571 |
Isoelectric point | 10.7456665039 |
Runs | 9 |
Runs residual | 0.0216216216216 |
Runs probability | 0.0495004808731 |
Amino acid sequence | MRLLGRSREISVYCREHRSQQAAGKGGEPMQQPTGTEEDTRRASHRKRS |
Secondary structure | LEELLLLEEEEEEELLLLLHHHLLLLLLLLLLLLLLLLLLHHHHLLLLL |
PRMN | - |
PiMo | - |