ENST00000556397.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000556397.1

Source

Gencode19

Same with

lnc-OR4M2-6:1,NONHSAT040606

Classification

intergenic

Length

530 nt

Genomic location

chr15+:20549989..20564412

Exon number

2

Exons

20549989..20550232,20564127..20564412

Genome context

Sequence
000001 CCTCCCGATT TTCCAGCATG ACTAGTGGTG ACAATATTGG GTCTCAATGG GTCTCTCCTG CCTCCAGTCC AGTGCCCTTT 000080
000081 TTTGGGGACC ATTATTGGCT TTTGGGGACC CTGAAGGAGG AATGGCCTGA TTATGCAATT TGGCTGGAGT GGAACGTCCC 000160
000161 CATGACGACA TGGCAATGAG TCTTCCCCAG CAGGCAGATG CCAGATGCAG TGGTGACCAC ACCTGCCATC TGGGAGGATT 000240
000241 CCAGGTGCAC CCCCAGCCCA GGCGACATCA ACGGCCAGCC CCATACGCGT GAGGATTGCG GCACCAGGGG CGCTCAGGAT 000320
000321 TGGGCCGGGC TGCTTCTCAG AAGAGGGGAC ATTGAGCCCA AGCAGGCTGC ACTCCTGCTT GGACGGAAGG TGCATGGGTG 000400
000401 GGGAGGGTAA TCACACCAAT AGAGACATGG ATGGACTTGT GCAGAACATA AATACTCTCT TTGCTTATGT CTATGTTACT 000480
000481 CAAAGGAACC ATGGAAATAA CAAATTCCCA ATTACAATGC AGTAAACTTT
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Predicted Small Protein

Name ENST00000556397.1_smProtein_197:409
Length 71
Molecular weight 7533.3779
Aromaticity 0.0428571428571
Instability index 59.2571428571
Isoelectric point 6.02154541016
Runs 9
Runs residual 0.0162659123055
Runs probability 0.0474199689886
Amino acid sequence MPDAVVTTPAIWEDSRCTPSPGDINGQPHTREDCGTRGAQDWAGLLLRRGDIEPKQAALL
LGRKVHGWGG
Secondary structure LLLEEELLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLLHHHHHHH
HLLLLLLLLL
PRMN -
PiMo -