ENST00000556316.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000556316.1 |
Source |
Gencode19 |
Same with |
lnc-DCAF5-2:1,NONHSAT037516 |
Classification |
antisense |
Length |
578 nt |
Genomic location |
chr14-:69705883..69727284 |
Exon number |
3 |
Exons |
69705883..69705934,69723771..69724018,69727007..69727284 |
Genome context |
|
Sequence |
000001 ACTCAGCCCT GGCCGGGCCC CGCGCCCTCG GCCGCCGCGC AGGGTCTGGA CGCGCGCCGC GGCTCCCTAG CCGGCCGGCC 000080
000081 GACGCTCGGG GCGTACTCAC AATGAGCGGG ATGGTGCGGT CCTCGCGGAG CTGCTCCGAC CTCCTGCCTG CCCTCTGCGC 000160 000161 GCCCCGGCCG CCGGAGGATG CTGCGTGGGC TCGGTTGTCC TGCCATAAGT AGTAGAAAGT GCCCAGGATC CAGGCTACGG 000240 000241 TCAGGATGGC GATGGCATTG GCGCGGATCT TCCTCATGGA ATGGACTCCA GCAGCATCAC AGAATCAAAG CAACACCTAA 000320 000321 GGAATTCACT GTTTCTTCAC ATACTTTGAA CTGTGAAAAC AAGAGTCATC ATAATAGCTG CAGTTTACTC AGTACCTACC 000400 000401 AGGTACTGTC ACCTATACTG TCTCTAAAGC CCCTACAACC CTGAGCTAAG GATGATCATA TCCCCAACTG CAGATGATGA 000480 000481 CACTGAAGCT CAACGGCTAC TCAACTTGCC TGGAATCCTA CAGCAAAATA CTGCATTGTG TCACAAGAAT TCAACTATGT 000560 000561 ACTCATGGAG AAGGAGGG |
Predicted Small Protein
Name | ENST00000556316.1_smProtein_101:211 |
Length | 37 |
Molecular weight | 3900.5159 |
Aromaticity | 0.0277777777778 |
Instability index | 121.441666667 |
Isoelectric point | 8.68231201172 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.042281777576 |
Amino acid sequence | MSGMVRSSRSCSDLLPALCAPRPPEDAAWARLSCHK |
Secondary structure | LLLEELLLLLHHHHHHLLLLLLLLHHHHHHHHHHLL |
PRMN | - |
PiMo | - |