ENST00000554412.2
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000554412.2 |
Source |
Gencode19 |
Same with |
NONHSAT050206 |
Classification |
intergenic |
Length |
1057 nt |
Genomic location |
chr15-:96006821..96036999 |
Exon number |
4 |
Exons |
96006821..96007615,96007949..96008038,96034728..96034778,96036879..96036999 |
Genome context |
|
Sequence |
000001 GTCTGGCCAT GTGGGATGTC TGTTCCTCGC TTCCCTCCTG CCATGGCTGT TAAGTTTCCT GAGGCTTCAC CAGAAACCAA 000080
000081 GAGGATTCCA GCACCATGCT TCCTGTATAG CCTGGAGAAC TCCAAGAAGG ATCGTGTCAG TCCTGCAACT TGTCAGTGGA 000160 000161 ATTAAATTTC AGGCGTTTTA AAGATAAATG GTAAAACTGA ACTGGAAATC CATCTGGCCG GCTGCCTGCT CTAATGAATA 000240 000241 ACCCCACTTT GGCTCGTGCA ATGACTTCTT CCCTTTGGAA TGCAAGTGCG GTGGCAGTGT CAAGGATGCC TGTGTGTTTG 000320 000321 CAGCAGGTTC CTTCCAGAAG CAGCTGCAAG TGCCACCTCC AGGCCATCTG GCCAATGTGA GGAAAGGAGG CTGCAAGGGC 000400 000401 TTGGCAAAAA CAACTTTCTG TTCCTCTGGT ATCCCCTGAT AACTGATTTC AAGTTATGGC CAAGGACTGC CTTATCGCCG 000480 000481 TCAGTGGCTG TCAAAAATTT ATAAGTATAT TCATTTCCCT ATTCAACTTA ATTGGTATTT TGGGTATGAC ACTAGAAAAG 000560 000561 CAAGTTAGAC TTGCCTGTTG GAGTCCAAGG ATACCTCCAA CAAAATTCTA GACAATAAAA GAAAGGGTAA GTGTCTGAGG 000640 000641 GGAGGGGGCA CTTACAAATT ATTCCATTTA ATGCTAATTC GAGGCTTCCA GATTCATTTT GGGAAAATCA AAGAGCAAGA 000720 000721 GCTGTATGCA TGGCTTTTTA AAACACAAAG AAAATTGGGA AGCATGGGCT TCCCAATTTT CCTGCGCATA AACTTCTAGA 000800 000801 ACAATTTCTA TTGTTGATAC TTTAAAAAAA ATCTTTTTCT TTTCTGTGAT GTGGTCTTTT AAACTCATAC CACAACTTAT 000880 000881 GGCTCCCTCT ACTTCCTATA TTTTAATTGA TCTTGAGGTT ATTTTCAAGT CACTGGGCTT AATGAACAAA TATTTTAGAA 000960 000961 TTTCTTCCTT TATATACACT CATTTCTGTC TCAATAAAAT GTCTAATCAG GAATTCACTT GTGTAGAAAA TAAAAAATAG 001040 001041 AAGTACATAC CCTTCAA |
Predicted Small Protein
Name | ENST00000554412.2_smProtein_848:1039 |
Length | 64 |
Molecular weight | 7489.8376 |
Aromaticity | 0.15873015873 |
Instability index | 44.6619047619 |
Isoelectric point | 9.06402587891 |
Runs | 14 |
Runs residual | 0.0772594752187 |
Runs probability | 0.0186173568526 |
Amino acid sequence | MWSFKLIPQLMAPSTSYILIDLEVIFKSLGLMNKYFRISSFIYTHFCLNKMSNQEFTCVE NKK |
Secondary structure | LLLHHHLHHHLLLLLLEEEEHHHHHHHHHHHHHHEEEELLEEEEHHHHLLLLLLEEEEEE LLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL LLL |
PiMo | ooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiii iii |