ENST00000554389.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000554389.1

Source

Gencode19

Same with

lnc-KLHL28-2:1,NONHSAT036622

Classification

intergenic

Length

693 nt

Genomic location

chr14-:45346077..45366280

Exon number

2

Exons

45346077..45346703,45366215..45366280

Genome context

Sequence
000001 AGCCGGAAGT GGGCAGAGTT TGCACGGAGG CGGAGCTTTA TTGGCAAACC TGATTGGCTT TTTGAGGCAG AGGAAGCTCA 000080
000081 CCTATGGCTA CTGCCACTAC AGGTCCACAG GGAGTAATGC CCGGCTACCA CTGATGTTCA TTAAGACCCA AGGGTTCTTC 000160
000161 AGTCGGCTTG TGGTAGATGC TGCCTGGCCT GGGACTCACC CTTCAGGACA GTGGGCTCCC TTCTGGCCCA AGGCAGGTCC 000240
000241 AGAATTACTG TCCAGGAGCC AAGGCTTTGA ATCAGGGACC TCAAGAGCCC GCTTGATGTT CTACCCCACT ATGGCTGCGC 000320
000321 CTGTACCTAA GGTGCAAAAG TCCCCTTTAC TTTTCCCTCT ACTTTTCTCC AGCATAAGGA GTCTCTCCCC ATAGCCACCA 000400
000401 TGGCTGGAAA TGTGCTGAGT CTCATTTGAA GCCAGCTAGT CTCAGAGTCT CACAGAAGGC CCACTGCATA CCTAGGTATC 000480
000481 GCTGGTATCG CTGGCTATTT GGAGCTTAAG AGCTCTTCAA TCCTCTGACA TCTTGATTGC AGCCTTTGAG AGACCCTGGG 000560
000561 CCAGAGGATC CAGCTATTGC CATGCTTAAA TTTCCAACCC AAATGTAACT GTGAGATAAA TGTTGTTTTA AGCCACTAAT 000640
000641 TTTTTTAATT ACTGTATTAA TTTTAACAGA TAATACAATA AGAGTTTTAA AAT
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Predicted Small Protein

Name ENST00000554389.1_smProtein_176:295
Length 40
Molecular weight 4004.5058
Aromaticity 0.025641025641
Instability index 64.4487179487
Isoelectric point 5.82061767578
Runs 5
Runs residual 0.0405354449472
Runs probability 0.0456986398162
Amino acid sequence MLPGLGLTLQDSGLPSGPRQVQNYCPGAKALNQGPQEPA
Secondary structure LLLLLLEEELLLLLLLLLHHHLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -