ENST00000553621.1
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000553621.1 |
Source |
Gencode19 |
Same with |
lnc-PCNX-3:1,NONHSAT037612 |
Classification |
intergenic |
Length |
721 nt |
Genomic location |
chr14+:71679350..71684933 |
Exon number |
2 |
Exons |
71679350..71679659,71684523..71684933 |
Genome context |
|
Sequence |
000001 GTGCCAAAAG TATGGAGAGA AGATGTCAGG AACGTGTGAG AACTCCCCCA GACGGTCTTT TGGAGTCACC CTGCCCTCCA 000080
000081 GACAATTTTG GTGCCGGCTG CCTCCAGGAA CCTGACTCTC TCAGTCTCTT ACTGTTTCGC TCCGTGGGTC AAGTCTCTGC 000160 000161 AAAGCCTTCA CGCTGAGCCT TGCCTTGCAG GCAGCCTTTG TGAGGCAGTC ATCATGGCTC AGCTAACTGC AGCAGGAAGA 000240 000241 GGCAGACATG GAGCTAAAAG CACAGCAGCT GGGATTCCAG GAAAGCAGGA AGTTCTGCAG TTAGCATCAG GAACACAGTG 000320 000321 AGAAGGCAAT CATCTGTAAA GCAGGAAGAG AGCCTTCCCC AGGAGTTGAA TCTGCCAGCA TCTTGATCTT GGACTTCCCA 000400 000401 GCCTCCAGAA CCACCAGAGA GAAATGCCTG TTGTCTGAAC CACCGTATGT TACCCTGTTA CAGCAGCCTG AGCTAAGATG 000480 000481 ATACTGGAGG CCCAGTTAAT CTACCTCAAC ATGACCCTTT TGTAACACAG GCTGGACAAA GGCTGTGAAA ACACTCAGTA 000560 000561 TCTAGAGTTT TCCAATGTGT GTGTCCTTCC CTATACACTT CATTTGCTTA TCCCCTTATT CATTCAACAA AGGAGTTCCT 000640 000641 TTTCTTTTCT TTTCTTTCCT TCCTTCCTTC CTTTCTTTCT TTTGACAGGG TTTCACCATG TTGGCCAGGC TGAGCTTAAC 000720 000721 T |
Predicted Small Protein
Name | ENST00000553621.1_smProtein_11:175 |
Length | 55 |
Molecular weight | 5941.7138 |
Aromaticity | 0.037037037037 |
Instability index | 66.2648148148 |
Isoelectric point | 6.10235595703 |
Runs | 7 |
Runs residual | 0.0330623306233 |
Runs probability | 0.0438716026952 |
Amino acid sequence | MERRCQERVRTPPDGLLESPCPPDNFGAGCLQEPDSLSLLLFRSVGQVSAKPSR |
Secondary structure | LLLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEELLEEELLLLL |
PRMN | - |
PiMo | - |