ENST00000552046.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000552046.1 |
Source |
Gencode19 |
Same with |
lnc-KCNC2-3:1,NONHSAT029500 |
Classification |
intergenic |
Length |
529 nt |
Genomic location |
chr12-:74642417..74677449 |
Exon number |
4 |
Exons |
74642417..74642627,74644265..74644361,74663089..74663233,74677374..74677449 |
Genome context |
|
Sequence |
000001 AGCCATGCAG CTATTTCACT GAAGAGTATT TTAGGTAAAC TAAACAACAA GACTATCCAT GAAACTCAAA AGCAGAATGA 000080
000081 GTGGTTTCGT GCATGGCCAA TATGATTGTG GCTCCCAGCA ACTGCGGCAC AGCTACTCTC CCATCTGGCA GTCTGATCCA 000160 000161 TCCTCCTTTT ATTATTTGCC TCCCGTCTGC ATGGAAGAAG TCTTTTTCTT CTTTAGAATA GATTTGAAAT AAAACCTCCC 000240 000241 TATTTTCACA AAACATCTGC TGAAAGAGAG AGACAGAGAA AGAGATGGAA ATTATAACAT CTCATGCTCT AATGAAGTAG 000320 000321 TAATCATAGA GGGGGAAGCA TAATACTTCA TTACCATGTC TGTAGAGGAA TGGAAGAGCA TATTATGCAA ATAAGAAATA 000400 000401 CAAGGCATTC CTTGAACCAT AGTCATCCTT GAGAGAAGTG GAATGTGTCT CAAGTTCTGT TTTATGAAGA TATCAACATT 000480 000481 TTTGAAAAAT ATGGAGATGA AAAATAGCAA CATAAAAATA AATCTCAGA |
Predicted Small Protein
Name | ENST00000552046.1_smProtein_92:220 |
Length | 43 |
Molecular weight | 4418.1846 |
Aromaticity | 0.0714285714286 |
Instability index | 56.080952381 |
Isoelectric point | 7.83660888672 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0274812627754 |
Amino acid sequence | MANMIVAPSNCGTATLPSGSLIHPPFIICLPSAWKKSFSSLE |
Secondary structure | LLLEEELLLLLLLLLLLLLLLLLLLEEEEELLHHHHLLLLLL |
PRMN | - |
PiMo | - |