ENST00000548978.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000548978.2

Source

Gencode19

Same with

NONHSAT071726

Classification

intergenic

Length

1852 nt

Genomic location

chr2+:74729722..74731805

Exon number

2

Exons

74729722..74730534,74730767..74731805

Genome context

Sequence
000001 TTCTGGGATT GTTTTCTCTT TCAGAAAGCG CTACTGCGGA GTGAACCGGT CCTTATATCT TAGTTTCGTG ACTTTGGGGG 000080
000081 CGGCAGGCCT GTGAGTTGTT TTCCGCCCTG GACGCTGTTT TGCAAAGATC TCTGCGCGCC CACCGCCACC CTCCCGGGCG 000160
000161 TGCGGGCCGG GAAGCAGCCA GCGGTGGGAA ACTCCGACGC CCTCCTCGAC ACTTTTCTCC CCCCAACTCC CCAAGACTCA 000240
000241 CTTCTAGGGA AGTCCTTTTT CCCATCAAGC CCTGGGAAAG ACTGGCCAGG CTGAGAGAGG GACCCGTCCT CCTCTGTGCC 000320
000321 AAAGGCGGGA GCAAATCCTG GTGCTGTCGC CTTTGGATGT GAGTCCTGGA AATGGCGGGG GTGAGGAAGG TGGGCAGGGG 000400
000401 CAAGGTTTGG CCCTCAGGCG AGAACCGACG CCTTGTCCCG GAAGCGCAGC ACGGCCGAGT GCGTCCGGGG GTGCAGACGG 000480
000481 CGCCCTGGGG TGGTCCTGCC GCCACCTCTC CTTTGACTCA GGAGCGCCGC GCCGCGTCCG GGCGCGTTCT CAGTCGCGCG 000560
000561 AAGCCAGAGA GGACCCTGGG CGTGATTCTC CCTCCCTGGC ACAGACGGAG ACCCGAGTGA CCCCGGGGTC CGGGTGGGCG 000640
000641 TGGGGAATGG ACCCATAGAC CCGGGACGAG CGGCGCGGAG CCCGCAGCTG GCCAGCTTCA GCCACCTTGG GAGACGCAGT 000720
000721 GCAGCTGCCG CTGCTGACAG ACAAGACCAA GGCTCGGCTG GGCCCCACCC CAGATCCGGC CTGAGCGCCT TCCGCGCTGC 000800
000801 TCGGCCTCAA GGCGAAACTT TTCGCGCAGA AACTCCTGGA GAACAGCCCC GGCCGCCAGG TACTCGCCCG CCCGGACCGC 000880
000881 AAAGCCCACA GAGCTTCAAT TCGCAGGAAG GGGAGTGGGG AGCCCTGAGC TGGGGTGTTC CTGGAAGAGG TCGGGGAGCG 000960
000961 GGGGGAGAGG CATTCCAGGC TGGAGGCCTG GAAACGTTTG GAAGCTTTGC TAACCTTGGA GACCATGTCA GGAAAGAAGC 001040
001041 GTACCCAGGC CGTCTGCTGT GTGCCCACCC CGATCCCCAT CAGTGCCCCA CGCACTCGAG CTCTTCTTCG GCGTCTGCAG 001120
001121 CCTCTTCATC CGCGCGGAGA GGCGGAGGTC TCCCGGAAAC AGTGTCCGAC TGTGGCACCC CAGAGCGTCC AATGCGAGCT 001200
001201 CAGGCCTTTC CCGCAAGTCT GGAGTTTTCT TATCCAGTTG AGGCCGCCTT CGCTGTACTC ACTCTCTGCC TCCCACCCCA 001280
001281 TCTTCTGCCA CCCGACCTCC ATCTTTGATG GTTAGCGCCT TCAGCCCTCA ACAGCTTCGC ACAACCAACC CCTAGAAGCC 001360
001361 GTGGAGTCAG ACCGGCCAGG GTGGGACCTA GGTTTTAACT CGGGTTCTGG CTACACACGC TGCGCCTCCA TACAGTTTGT 001440
001441 CCCAGGTTTG GCAGCAGGCC GGCTACCTTC AGGAATTCTT TGCTTTGGCT TCTGTCTGTT CCTGTCTGTT GGGCAAGTTT 001520
001521 CTAGCTACCC CACTGAGAGA ACCATAGAAC AAGGACCCTG GCATGGCATA CAGACAAGGA ATGTTTGCTG AATTAATGGA 001600
001601 GCTGGTGCCT TGCAGCTTCC CTTTTGTTCC TTGAAGTTGC CCTTGCTCTC CTCCACATCA GCTCCCTCTC CTCCTCAGCT 001680
001681 ACTTATTCCC CACCCTGGCT TCTTCTAGTC GCAGTCCCCA AGTACTTGCT GAATCCTGTA TGGACAGCCT AAGCCTCCAT 001760
001761 TTCTGACAAT TCCTGTGGCC CCACTCCATT TGTTTTTTAG ACTTCTCCCT CCTTTTTGTC CCCATCCCCC AAGTTATAAA 001840
001841 ACTATAATGC AA
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Predicted Small Protein

Name ENST00000548978.2_smProtein_371:619
Length 83
Molecular weight 9032.3031
Aromaticity 0.0365853658537
Instability index 70.1036585366
Isoelectric point 12.127746582
Runs 11
Runs residual 0.00175535846268
Runs probability 0.0275890864127
Amino acid sequence MAGVRKVGRGKVWPSGENRRLVPEAQHGRVRPGVQTAPWGGPAATSPLTQERRAASGRVL
SRAKPERTLGVILPPWHRRRPE
Secondary structure LLLEEELLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHLLLEE
ELLLLLLEEEEELLLLLLLLLL
PRMN -
PiMo -