ENST00000548617.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000548617.1 |
Source |
Gencode19 |
Same with |
lnc-NCKAP1L-1:4,NONHSAT028630 |
Classification |
intergenic |
Length |
454 nt |
Genomic location |
chr12+:54822087..54823187 |
Exon number |
2 |
Exons |
54822087..54822436,54823084..54823187 |
Genome context |
|
Sequence |
000001 GCCGGGTCTT CTGGGCATAG GGACTCCTAG ATGAGTGGGG CAGGGGCTGA GGAATGCAAA TGAGATGTCA GTGTGCCCTT 000080
000081 CCCTCAGCCC ATTCAAAGTC TGTAGCCCTG GATTGAATGA ACTGGAGGAG AAGCTTATTT GCCAGGGGAT GGGAAGCAGA 000160 000161 AACCCAGGTG TTTGGTTACC TGGGGCCTGC CTCTCCTTCA GCCTGAGATA TGGAGAGAGC AGGGCTGGAA GGACTCCCTA 000240 000241 CCCCCACCTC AGCCTCGCTT CCCGCTCTGC GTCCCTACTT GGCTGTCCTT GCTTCAGTCT GCCCCTGCCC CACCTCCCAC 000320 000321 CTCCAGCTAC TGCCCTACAA GTCAAGGAAT GTTTGGGCCC CAGGGGTAGA GCTGGGGGTT GGATAAGGGT AAGACTGCAC 000400 000401 AGGGGCCAGA TGGGCTGGTT TGGAGAAGGG TAATGAGATC CCAGGAAGAG AGAG |
Predicted Small Protein
Name | ENST00000548617.1_smProtein_209:385 |
Length | 59 |
Molecular weight | 6086.0706 |
Aromaticity | 0.051724137931 |
Instability index | 45.4275862069 |
Isoelectric point | 7.82525634766 |
Runs | 11 |
Runs residual | 0.0330617658204 |
Runs probability | 0.0380755086637 |
Amino acid sequence | MERAGLEGLPTPTSASLPALRPYLAVLASVCPCPTSHLQLLPYKSRNVWAPGVELGVG |
Secondary structure | LLLLLLLLLLLLLLLLLHHHLHHHHHHHHHLLLLLLLLEELLLLLLLEELLLEEELLL |
PRMN | - |
PiMo | - |