ENST00000548564.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000548564.1

Source

Gencode19

Same with

lnc-SLC48A1-2:5,NONHSAT027955

Classification

intergenic

Length

573 nt

Genomic location

chr12+:48225158..48231681

Exon number

3

Exons

48225158..48225236,48228022..48228434,48231601..48231681

Genome context

Sequence
000001 AAACACAACT CACAAGCAGA GGTAGGGGTA TGTTCAACCT GATCGTCCTC AAAGTAATGC CAATTAAAAT GAGACAAAGA 000080
000081 AGACAGACAA ATAGCCAGCA GTTCCACAGC GACTCAGGGG ACTGCCAGGG TTCAAATCCT GCTCCTGCTA GATGCCACTT 000160
000161 CTGCTGCTCT TCATTGCTGC CCTAGACAAG GCCAGGCCCT GCGGCGTGCT GCGAGCCTTC CTTCCGTTAT CTTTACCAGC 000240
000241 TCTACATGGT CATTCACAGA TGAGAAAGCT GAAGATCAGA GAGCTCACAC ATTTCCCACA AGGTTACACA GTCAGTAAGA 000320
000321 GACACTATCA GGATTCCAAT GACCTGCTGT TAAAGTTCAT CTCTTATTCA CTCATTGCCT CCCTCAAGGC TGAAGAGTGG 000400
000401 GGTGGAGGGG AGACCAGCAG AGCTACTGAG CTCAATCTGC CTCCTTGGCC CTCCCAGCCC AGAGCTCTGC CAGCGGTGGT 000480
000481 AGGAGGAGTG TGTTCTGGTA GATATCATGG AGCAGGAGTC CCTAGCACCA AGAAGCTGAG ATCCGGAAGA GGCGCCCCAA 000560
000561 AAAATCAGCC TGG
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Predicted Small Protein

Name ENST00000548564.1_smProtein_29:184
Length 52
Molecular weight 5779.6854
Aromaticity 0.0588235294118
Instability index 63.5607843137
Isoelectric point 9.30023193359
Runs 10
Runs residual 0.0418365365948
Runs probability 0.0471118177
Amino acid sequence MFNLIVLKVMPIKMRQRRQTNSQQFHSDSGDCQGSNPAPARCHFCCSSLLP
Secondary structure LLEEEEEEELLEEHHHHLLLLLLLEELLLLLLLLLLLLLLLEEEELLLLLL
PRMN -
PiMo -