ENST00000548335.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000548335.1

Source

Gencode19

Same with

lnc-FOXG1-5:5,NONHSAT036120

Classification

intergenic

Length

574 nt

Genomic location

chr14+:27278623..27289909

Exon number

5

Exons

27278623..27278646,27281439..27281602,27286126..27286252,27287910..27287986,27289728..27289909

Genome context

Sequence
000001 CTAAAACGGA TGTTGGCCTG CCAGGGAGCA GCCAAGGTGA AGTTTTCAAC CAGGCCGACC AACTTCAGAG TCCACTGGCT 000080
000081 TCAAAACAGT GCTTTACATC CTCCTTCCAA CATTATTCAC AAGCCGATCA AGACTGAGAG AGTCACAAGT GTGTGAAACC 000160
000161 TGTATTCTTT CTGACTTCAT TTTCCCTGGT CGAAATTTTT GTAGAATAGA CAAATCAAGA ATGATGACTT CTTAAGATGC 000240
000241 AGTATTCAAG TTCAGAAATC TATACTCAGA TGACCTTATG TAGGTCATCT GCTTCTGAGG TTTATCTCAC CAGTGAGAGT 000320
000321 TGAAAACATA TCCTCTACTT ATATTAAACT AGGATGCATA AGAGGGTTGA TAAAATGGAA TTCAAGTGAA CATTTTATGT 000400
000401 GAAGAACTGC AGTAATGAAT TCTGAATTTG TTCAAATCAT TGAAGATGTG TGAAGACAAA ACATTCACTC AAATCTCTAT 000480
000481 CATGTTAGCA TGTTATTTAT CATTGCTCTG TTCTTCATTG TTGAATAATG CAATTGAGTT AAAAAGAATA AACATTATTT 000560
000561 ACCGAAGACT CATA
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Predicted Small Protein

Name ENST00000548335.1_smProtein_236:322
Length 29
Molecular weight 3182.4677
Aromaticity 0.107142857143
Instability index 65.5321428571
Isoelectric point 4.25201416016
Runs 6
Runs residual 0.0110663983903
Runs probability 0.0421598068658
Amino acid sequence MQYSSSEIYTQMTLCRSSASEVYLTSES
Secondary structure LLLLLHHHEEEEEEEELLLLEEEEEELL
PRMN -
PiMo -