ENST00000547177.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000547177.1

Source

Gencode19

Same with

lnc-HNRNPA1-2:1,NONHSAT028612

Classification

intronic(AS)

Length

735 nt

Genomic location

chr12+:54656399..54672847

Exon number

2

Exons

54656399..54656721,54672436..54672847

Genome context

Sequence
000001 AGGAGCAGCA GTAAGAAATG AGAAATGCAC TCAGACATCG GAGGGGACAT AATTCTCTTT TAGACAGTGT GACCCGGAGT 000080
000081 ATTAGGGTCA AATGAAACAC AAAGCCAGTC AAACAATTTA AGGGCTAGAG CCTAGACCAG ATAAAGCATC AAGACTGGTG 000160
000161 GTTCACACTG AGCTTAGGAG GAGGGAGCTT TCCAGCATGA GAAATGAGAC ATGGCTGGCA GGATGATGGA GTGATTAAGA 000240
000241 TAGAATCCCA ATACCATGAC AGAGGAAAAG AAGATGAGCC TCTGAACACA ACCTTATCCT TGTGGAAATC TCCAAGGGAA 000320
000321 AGGATCCTGG AATAAGCAGA GTGGGCATTA CCAAAAGGAG ATAGACTGCA TGTAAAACAC ACTTCGAAGG AAATCTAATT 000400
000401 AAAAGGCAAG GAATAATCCA GGTGATGGAT GAATCTTCTG TCCCCAGAAC CCTAAATATT ACCCTCTTTG TTTCTTTTTT 000480
000481 ATTCCAAAGT CAGATATCCT CAAAGGAACA GCAAAAAGAG GGACTTTAGG ATATCTTCAA TGGTGTAAAG AAAAGAAATA 000560
000561 TATGAAAGTT CCCGGGAGAA AGAGACTAAA ATAAAAGCAC TGGGCACATG GATTACATAA AACAGAAAAG GGGTTGTAAG 000640
000641 TATGTGATTA TGACTAGAAA CACAAAACAA TCGACTTCAT TTTTTATTTA ATTTTAATCA CAAATTATTA ACCTTGCAAA 000720
000721 GTTTTAAACA TTAAA
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Predicted Small Protein

Name ENST00000547177.1_smProtein_203:334
Length 44
Molecular weight 5164.6814
Aromaticity 0.0697674418605
Instability index 53.5069767442
Isoelectric point 5.57220458984
Runs 7
Runs residual 0.0054873268879
Runs probability 0.0463825169707
Amino acid sequence MRHGWQDDGVIKIESQYHDRGKEDEPLNTTLSLWKSPRERILE
Secondary structure LLLLLLLLLEEEEEEEELLLLLLLLLLLLLEEEELLLHHHLLL
PRMN -
PiMo -