ENST00000546389.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000546389.1

Source

Gencode19

Same with

lnc-POTEG-4:16,NONHSAT035485

Classification

intergenic

Length

413 nt

Genomic location

chr14+:19655782..19656886

Exon number

3

Exons

19655782..19655871,19656089..19656224,19656700..19656886

Genome context

Sequence
000001 TGAAATTTCA TTCTGATTTT CTGGCTGAAG ACTATTCTCT TTGTGTATGT CCACCACAGT TACTTTATCC CTTCATCTGT 000080
000081 GGATGGGCAG TCTCGCTGTA TTGCCCAGGC TGGAGTGCAG TGGCATGATC TCAGCTCACT GCAAGCTCTG CTTCCTGGGT 000160
000161 TCACGCCATT CTCCTGCCTC AGCCTCCTGA GTAGCTGGGA TTACAGGCAC CCGCCACCAC GCCCAGAATG AAACATATAT 000240
000241 GGAAATGTTC TGTGCAATCA AAACAGCAGT GGTAACAGAG GAGATGTAGG CTCTGAGTGT CTCACTGGAG ACTGAAGTCC 000320
000321 ACAGATATGC AACAAAGCCT TTGTCTCCCT GATGTTTTTG CCTCCTGCTG GTCATGTGCT TTCACACATC AAGAGAGGAC 000400
000401 ATTTAACATT TGA
[back to top]

Predicted Small Protein

Name ENST00000546389.1_smProtein_326:412
Length 29
Molecular weight 3263.7024
Aromaticity 0.142857142857
Instability index 99.3071428571
Isoelectric point 5.30194091797
Runs 7
Runs residual 0.0467806841046
Runs probability 0.0406288641583
Amino acid sequence MQQSLCLPDVFASCWSCAFTHQERTFNI
Secondary structure LLLEELLLHHHHHHHHHLLLHHHHHLLL
PRMN -
PiMo -