ENST00000544306.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000544306.1

Source

Gencode19

Same with

lnc-ROCK2-3:2,NONHSAT069140

Classification

intergenic

Length

1139 nt

Genomic location

chr2-:11245443..11272347

Exon number

5

Exons

11245443..11245788,11260889..11261088,11264709..11264911,11268847..11269012,11272124..11272347

Genome context

Sequence
000001 ATTCAGCTGG CGCGCTGCTT CCTATCTTTG TAAGGGAAGA GCTAAGTGCA GACAAAGCCC TGACGAATAG AGGCCTGCGC 000080
000081 AGAGTGCCCG GGGTGCAGGG CAGCAGGGCA GCCAGTGAAC CACTGAGCTC GCACTGTAGC CAGTCCTGTG TGCCCCTGCT 000160
000161 GGATTCTGCT TCTATGAGGG AGGCAGCAAG GAGTTGGGAC TTCACAGGTG AAAGGACTTG CCAGGTTTTG TTCAGGTTTA 000240
000241 GCACAAGCTG TGATGAATAT CTTCAAGCCT CTGCTTCCTG CTGTGGAATT GTTGCCAAAG GACACATTCC CAGATGGGAT 000320
000321 TACTGAGTCA GAGGAAGTGG ACATTGAGTG GCTCTCAACA GACAGGCTGT GTTGCTCTCA CAGTGCCCAG CTTCCCATGG 000400
000401 GTGGCCAGCC GAATGCATTA TGGGAGAAAG CAGGTCTCGT GGATAATATT TCTGAAGATC GGAGCAGGTT GCCAGGTCCA 000480
000481 CGTCGGCCAT GACTGCAGCA CGCTCCGGAG GCAGCAGGGG GCACCCTGGA GCTTCGCATC CTCCTTCAGG CCCGCGGCAT 000560
000561 CTCCCCTGGC TCCACCATCC CCAGGTGTCT CAGGCCTGTT TCCTCCTCAT GAGAGGTGGA GCGGTGGTTC CCAAACACGA 000640
000641 TGTGGGAAGT GTGTTAAAAT GCAGATCCTG GGCTCGACCC TGAAGCTCTT CCGGCATCCA CCTTCCCAGG TGACCAGACT 000720
000721 CTGGGGAAGG CATCACCTCA AGACTCCTGC ACCCTTCCTC CAGAGTCCTG GGATTCAGCT AAATCCTGGG AAGGTGCCTG 000800
000801 CCTCCCTGCT GCGCCTGGCC ACGTGGAAAC CCCTGTAGCT CCCTGGCTGT GCAGGAGCAG CCACAGTGTG CCCCTCCCAG 000880
000881 GACCACCATC CCCCTCACTG TCTCTGAGGC ACCTGCGTGG ACCGGGTCTG GATTGAGTCT CATTTCTCTG GATTCCCACG 000960
000961 GCAGCCGGCG GCTGCCTCTC CCACACCCGT CACTCTGTGT CATGGAAAGC TGTGTGTTTG TCTTCATTCC CACCGAGTCT 001040
001041 GAGCCACTCG AGGTCAGGGC CATGACCGTG AGCTACACGT CCTTGGCGCC CAGTGTGAGC CGTGTACAGT AGAGGCTGAC 001120
001121 TGACGTCTTG GAGGCAGAA
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Predicted Small Protein

Name ENST00000544306.1_smProtein_488:682
Length 65
Molecular weight 6825.8145
Aromaticity 0.046875
Instability index 47.2171875
Isoelectric point 11.7125854492
Runs 9
Runs residual 0.00796875
Runs probability 0.0298631965298
Amino acid sequence MTAARSGGSRGHPGASHPPSGPRHLPWLHHPQVSQACFLLMRGGAVVPKHDVGSVLKCRS
WARP
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLEELLLLLLLEEEELE
ELLL
PRMN -
PiMo -