ENST00000538641.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000538641.1

Source

Gencode19

Same with

lnc-CASP12-1:2,NONHSAT023932

Classification

intergenic

Length

542 nt

Genomic location

chr11-:104410659..104480049

Exon number

4

Exons

104410659..104410753,104415427..104415514,104415604..104415877,104479965..104480049

Genome context

Sequence
000001 GAGATCCTGC TTTCTCTTCA GAATGCCATC TCTAGGATGC CAATGGGCTG TGTCTACAGT ACTATGTAGG AAAGTGCTGC 000080
000081 AAGAGGTACT TGCACTGGGA CTACTAAAAG AAACAACTTT ACCCATGAAG AATGCAGAAA AGCAAGGCAG GATGGTGGCC 000160
000161 CACCCTGGAA GGACATGGAG CCAAGGGAGC CTCCCCCATC CAGGGAGGTG GTGAGTGAAT GCTGTGGCCC TGGGAACCCA 000240
000241 CGCTTCTCCC ATGGGTCTTC GTACCCTTGG GTCAGGAGAT CCCCTCGTGG ACCCACTCCA CCAGGGCCTT CAGTCTGACA 000320
000321 CACAGAACTA TGTGGAGTCT CATCAGAGCA GCCATTGAGT TTGCCGAGAA TGATGGTTTC CAGCTTCATC CATGTCCCTG 000400
000401 CAAAAGACAT GAACTCATCA TTTTTTATGG CTCCACAGTA TTCTATGGCT GATGGCATGA TGAAGGCTCT AATCATTGGA 000480
000481 AGGACACCTG CTCATCATAG AGAGATATTT GAAGAAGGCA CAGGGCCTCT GATTAACTTT GA
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Predicted Small Protein

Name ENST00000538641.1_smProtein_218:451
Length 78
Molecular weight 9062.3974
Aromaticity 0.168831168831
Instability index 42.6496103896
Isoelectric point 6.38177490234
Runs 11
Runs residual 0.00677583286279
Runs probability 0.0373127137834
Amino acid sequence MLWPWEPTLLPWVFVPLGQEIPSWTHSTRAFSLTHRTMWSLIRAAIEFAENDGFQLHPCP
CKRHELIIFYGSTVFYG
Secondary structure LLLLLLLLLLLEEEELLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHLLLLEELLLL
LLLLEEEEEELEEEEEL
PRMN -
PiMo -