ENST00000537801.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000537801.1 |
Source |
Gencode19 |
Same with |
lnc-BHLHE41-2:6,NONHSAT027383 |
Classification |
intergenic |
Length |
588 nt |
Genomic location |
chr12-:26107968..26111998 |
Exon number |
4 |
Exons |
26107968..26108174,26109160..26109280,26109572..26109697,26111865..26111998 |
Genome context |
|
Sequence |
000001 GCGGCCGCCC AGCGCCCGTC CCCGCGCCGC ACTCCCCGGC ACTCCCCGGC GCTCCCCGCG CCGCGCGCCC CGCACCGGCT 000080
000081 GGAGGCCCCG GCCCCCCGGC GTTCCCTCTC CGCGCACCTC CCGGCCCGCG CTAGCAGGTA GCAGGCAAGA GTGTGGTTAT 000160 000161 CGTTGGACCA GGATTCAGGA TCTGACTGAG TAGCTGACTC TTAATCCAGT TTGTGTTGAT CACCAGGAGG ATCTGGACCT 000240 000241 CAGTATTACC ACATCTAGAG CTATAATCAC ATCCCTGTTA AGCCTTCCTG AGATCACACC AAATGTCCTT GATGGGAATT 000320 000321 GTAAACAACC CTTACTTCTG GTTTCTAATG ATATTCCAGG AAAGGAGCCT AACTAGAGTC AGTGATATGC CAACTCCACC 000400 000401 TTTGCCTTCC ACCATGTTTG GAAGCTCCCT GAGGCCTCAC CAGGAGCAGA TGCTCGTCCC ATGCTTCCTA TAAGCCTGCA 000480 000481 GAACTGTGAG CCATAATAAA CTGTGAATTA TAAATTGCCT TTATAGCAAT GCAAATGGAC CAGTACAGAT GGGATGCTGG 000560 000561 GAAGACAGTT GTTTCCACCT TCAGTAAA |
Predicted Small Protein
Name | ENST00000537801.1_smProtein_302:472 |
Length | 57 |
Molecular weight | 6520.6868 |
Aromaticity | 0.125 |
Instability index | 62.8607142857 |
Isoelectric point | 6.51190185547 |
Runs | 10 |
Runs residual | 0.0252732240437 |
Runs probability | 0.0383324500973 |
Amino acid sequence | MSLMGIVNNPYFWFLMIFQERSLTRVSDMPTPPLPSTMFGSSLRPHQEQMLVPCFL |
Secondary structure | LLEEEEELLLHHHEEEEELLLLLEEELLLLLLLLLLLLLLLLLLLLLLEEEELLLL |
PRMN | - |
PiMo | - |