ENST00000532929.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000532929.1 |
Source |
Gencode19 |
Same with |
lnc-RDX-2:2,NONHSAT024051 |
Classification |
overlapping(AS) |
Length |
803 nt |
Genomic location |
chr11-:109283980..109454369 |
Exon number |
4 |
Exons |
109283980..109284282,109286650..109286897,109383317..109383451,109454253..109454369 |
Genome context |
|
Sequence |
000001 GTATAAAATA AGTTCAACAC TGGCAACCAT CTGATAACCA CAGAGAAATG AGACTGAGGA TAAAACTAAT CTAAAGAGGA 000080
000081 TACCAACGAA GCTGTAACCC TCCAGTTACA TAAACCAGTG TCCTGAGGGA GAAGCTGGTG CCCTTTATCA CACAGCTAAC 000160 000161 AACGCTCCTG GCCCATGGAT CAGAGAAGTT GAAGGAAAAT ACAGAGGAAG TTCTAACAGT GGCAGACCTA ATTACTGCAC 000240 000241 CATGCCAAGC AGGCGCTGGG AACAGCCTTT GGCTGACAGC CAGCAAGGAA ATGGGGACTT CAGTGCTACA ACTTCAAGGA 000320 000321 ACTAAATTTT GCCAACAAAT GTGAATAAGC TTCCAAGTGG ATTCTTCCCC AGAGCCTCCA AATAAGAGCC CAGCCTGGCT 000400 000401 TTCATCTTGA TTTCATCTCT TTGAGACTCC AAGCAGAGAA GCTGGTCAGG CCCCCACCAC TTCCTCCACC CATCAGACCT 000480 000481 CTGACCTACA GAACTATCAG GTAAAATATT TTCCCAGGGG TTCAAGCTGA GTTTTGACCC AAGTTATTGT CCTAGAATCT 000560 000561 GTGGGGGAAG TACAAGTAAA CCTTAAAGAA GACAAATAAC ACCTTATGAG GTGTTTGCCT TAGGTGAGTC TTATTTATAT 000640 000641 TTTCCAGGCA ACAAGAATAT GACATCCTGT AACAATGGCG AGTGAATGAT TTCCACATGC TTAGAGGTTT GGGAGAATCT 000720 000721 GGAAGTTCAC GGTTCCCAAG CACATCTATC TCAAATATCC CCATCTCAGG TCTCAGGCAT ACTCCTTTCC TATCAAGGCA 000800 000801 TAA |
Predicted Small Protein
Name | ENST00000532929.1_smProtein_290:343 |
Length | 18 |
Molecular weight | 1900.247 |
Aromaticity | 0.0588235294118 |
Instability index | 44.6705882353 |
Isoelectric point | 7.97552490234 |
Runs | 5 |
Runs residual | 0.00735294117647 |
Runs probability | 0.0266560678326 |
Amino acid sequence | MGTSVLQLQGTKFCQQM |
Secondary structure | LLLHHHHHLLLEELLLL |
PRMN | - |
PiMo | - |