ENST00000530686.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000530686.1

Source

Gencode19

Same with

lnc-METTL15-4:1,NONHSAT018491

Classification

intergenic

Length

973 nt

Genomic location

chr11+:27528385..27697525

Exon number

6

Exons

27528385..27528445,27605816..27605884,27661392..27661552,27679788..27680009,27680718..27680775,27697124..27697525

Genome context

Sequence
000001 GAGTACCGGC TAGTATCGCG AGATCAGGAA GGTGGCCGAG TGTGTCGCCG CGGCCATCAG GGGGGTTATA GCCATGTGAC 000080
000081 TGATCTTCGT CCAAGAATAT GTAAAGAAAA AGTGTTGAGT TGGCTTTTAG GGCTAGAGCA ATGTATCTTA GGCTCACTTA 000160
000161 AGGAAGCTGT AGAGATGAGC CCAAGGAGGG AAACCAGAAG AGCCCCCCAG GCTCACCAGT TGTTTGTTGG CTCCCTACAA 000240
000241 ACATGTCATT CAAGTGGCTA ATCTTACAAC AGCACAAATT CATCTAACCA GAAAGAGAAG AGGAGGCTCC AAAGGCACTT 000320
000321 GACTACTGAG CATCACCCTG GACGTGTACA AGTCTGCGTC CTTATTGTTT TCTTCATTGG GCCGAACTTT CTGGTCCTCA 000400
000401 TCCAACAGCT CTTCTATCAC GTGTTCGAAA GTGTCAGCCA ATGATGTCAA GCCTCTTGAA CCTGCCTTGG GCCCATTCAC 000480
000481 GCTCTCCAGA GTCCCATGGG TCCGCACACC TGGAGATACT CTATTATAGC AAAGAAGAAA GATAATTTCA TTGAGCCATC 000560
000561 CTGTTTTACA GCACCCAACA GAATCCCTTC AAAGCCTCGT GGTCTGACAC CCTATGCTAC GTGACTTGTG ACCCATCCAT 000640
000641 TTGTCATGTT CTTCGGGAAT GTGGCTAAGG GGCTAAGATG TGACTTGAAA AGAAAGGTAG AACAAGATCA TCTCAAATTT 000720
000721 ATTATCAAGG AATAGTTCAG AAAACGACTT CAGACCACAG AGACAGCAGA ACAGATGGTC CGGCATGGAT AGAGCATCAG 000800
000801 ACACTCACAG ACTGTGCCAA CAAGAGCCAT CGAGTCAAAA CAGCCAAAGG AAGGAGGGTC ATGGAATGGG TTCTCTCACA 000880
000881 CCAAACTGAT GCCCAGAGGC CCTCAGCATG AATAACAAAG GCAACCAGAC CCACAAGCCA TACTGAGTGG ATACAAAACC 000960
000961 TATACCTAGG CTG
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Predicted Small Protein

Name ENST00000530686.1_smProtein_440:544
Length 35
Molecular weight 3957.408
Aromaticity 0.0882352941176
Instability index 86.6352941176
Isoelectric point 6.23077392578
Runs 7
Runs residual 0.0197319434103
Runs probability 0.0253110253111
Amino acid sequence MMSSLLNLPWAHSRSPESHGSAHLEILYYSKEER
Secondary structure LLHHHHLLLLLLLLLLLLLLHHHHEEHHHLLLLL
PRMN -
PiMo -