ENST00000529823.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000529823.1

Source

Gencode19

Same with

lnc-BLID-1:5,NONHSAT024779

Classification

intergenic

Length

3334 nt

Genomic location

chr11-:121959814..121972874

Exon number

2

Exons

121959814..121962427,121972155..121972874

Genome context

Sequence
000001 AACAGGAGAG GGAGCAAGCG CGAGAGGATA TTAGAAGAGA GGCTTGTCTC CAAGATATGG AAGGAAGTGA GAAATGACAG 000080
000081 GGCTGCAAGC TTTGTATGTA GGAGCCCGGC AGGGCGGGGG AGCGGCGAGG AGAGCCAAGT GGATTCTCAG AAAAGGGGGG 000160
000161 AAGCCATCGA AGAGCTAAAG GTGATTAGAG GGGGATATTG ATTTCTTATT CTGCCAGAGA TTTAAGCAGG CATGCGAGGA 000240
000241 ATCTGCACCA TGGTTGGCAA AAAGAGACCC GTTGCCTCCT GTAACCAGAC ACTCAGGCTT TCCAGGAGCC CAGGGAGCAA 000320
000321 GCCGAGAAGA AAGGGGGCAG TGTGGTCTAG GAAAATTCAA CTTGTCGCTG ATTTGTGCCT GATGCCTGCT GTCCGTCAGC 000400
000401 AGCCTCCCTT ACAATCTTTT TTTCTCTCTC TCCTTTTTTT TTCCTTGCCT TCTCCTTCTT CACTGAAGCC TAGGGGAGCC 000480
000481 AGTAAAGATT AAATGTGCTT CTCAAAGGCA GCCACTTCAT GCTGCTATGT CGAAAGGGCC ATTATTATTA TTATATTTTA 000560
000561 ATGGTAAAAG AGAAAAGGAG AGAGGTTGAG CGAGCGAGAG AGAAGCTAGG TGTGATGATG ACAGACTAGC TTTTCTGAGA 000640
000641 GGAAAAGGAA AAGGGAAGGG AGAGAAAAAG GAGAGCCTCT GAGCTCAACG GAGGATTGTG CCTGAGAAGA ACCCACAGAG 000720
000721 CTGGTCCTAT AGTACCCCTC CTCAGGAATG TCTCCCCAGT GCAAGGACAA AGACTGAAGA GACTGCTATA TTGATGGACT 000800
000801 CTCAAGCCAA CTATGAAGTT GAAACAAAGA AAGTGATCAC CTGAAGACAC CTCCTCTGCT AAGAAACACC CCCAAATTGT 000880
000881 GCAGCTTCTG CCACTAGAAC TCTCAGAACA AGAGACAATC TTTTCAAGAA ACAGAAAAAC TCAATAATGA CATCTAGATT 000960
000961 TTCATGAGCC AAGAACTTTC CCTTCCTCAT GTGTATTCCT CTGTTTGTAC TTAAATTCAT GTGACATTCA TTTTTTTCCT 001040
001041 AGTATGGATA TGCTTATTAA TGCACTTGTT TCAAAATCCC AAATTGCACA AATGTGTTAA TATTTTAAGA AACAAAATGA 001120
001121 ATCCTACAAG GAGAATGATT TTTAGCCACA CATAGGGTTG GATCTTGAGA GTGACCTACA GAATAAAAGT ACTTTTAAAA 001200
001201 TAAAGTAGTC AGAGGCTATT CAAAGGGTAA AATAATCATA GTACCACATT GGTCCACTTG ACACTAACCA ATCGATCATT 001280
001281 TTTTTTTAAT CAAGAAAGCT AGATTCTATC AGATAAAATC ACTGCTTCTA AAGAGTTTAA ATCTAGTTAG AAAAAGTTAT 001360
001361 AGAAATGTTT GCAAAGATAA GTAACAGATA GAGTCAGTAG AGGATAAGAT CAAAAACAAA ACCAAGCAAA AGATGAGTTC 001440
001441 AGGGGAGTTT GCCATCAAGT TGGCAAAACT GACTTACTTA GGGAAGAAAG TTATAAAACA GGAAAATATG AGATGAACCT 001520
001521 TGAGTGATGT GGAAGATTTA GATAAATGGA AAGGAAGGAG AAAATGGAGT TCTTTAGGTG GTTGTAATTG GAGGAGGAAA 001600
001601 TGAATACACA CATCTTGTTG ACTTAAACCC AGACATTCAG CAGCTCTCTA TACATATCTG GAAAAGACTG CACAGTCACC 001680
001681 TCCTGTCTCT CACCCCAGGT ATTACTTAGA ATTATTATCA TATTTCCCTT CCTTTAAAGT AAGTAAGGGT GATTGGTGAC 001760
001761 AATATGGAGA ACTATGATTT TTCCATTAAC CTAATAATAA TTGGTATTTA TTGAGTTCTG TTAAGCATTT TACATATTAA 001840
001841 CTCACTTAAG CCTTTCAACA GCCTTGCAAA ATAGGTATTA TTATCCCCAT TTTACAGGCA AGAAAACTGA GGTTTAAGTA 001920
001921 ACTTGCCGAA GTGCCATATA CAGGGCTCAC ATTCAGTATT GCAGTTGCAA AGCTCATGAT CTATAGTGCC AAGTTGCAAT 002000
002001 ATTGTAGTCA ATGTCACAAT TATTACCCCT TTTTATATTC CTTGATATTT TTCCATGGCA AACAATTAGC TATTTCATTT 002080
002081 AATAATCACC TAAAACTTTT CAGTCTTCTG ATTAAAATTA CGCTGGAGTG ATAGAATGTA TTTTCATGAT AGAAATTGGG 002160
002161 AAAAAAAATG GGGAATGAAG TTTATCAGCA TTTCAGACTT GTTTTTTTTT TTTTTTTTTG CAAGACTTTG ATGAGATTGT 002240
002241 TCACTTTTGT CTATGTAAAA TCCCAAATCC TTGAGAATAA AAAAGGGGGA GGTTTAAGTC ACTTGTTGCA ATGCCCTTTT 002320
002321 TAATAGAGGC AATAAATCTA AAGGCCATAA ATTTAGAGTG ACTTACAGAA GATCGAACTT TGGAGTGTGG CAGAGTAAGG 002400
002401 GATGGAAACC GGGCCCTCCA GTTCACTATC AGTAGCTTTT GCACTGGTCT GCCCTTCCTA AATTAAGTAT GCACTTCAAT 002480
002481 TTGATGAGTG GAAACAGTCT ATCTGGGCAG TAACCAGGGA GCTTTGTGCC TAGTAGATTG CTTCTGTTCT GCACTTCTTT 002560
002561 GGTTTCCCAC CTCAATGTAA AAAATAGCTA GCAATGAAGT CCAGAAGTTG TCAATGGTTC ATCCCCAGAA GAATGCATAA 002640
002641 TGTCCAAAGT TGTATGTGTA TGATGTCTTC AATGGTATTA AGTTATTTCA AATTCTTAGT TCACCTACAT AAATCATTTC 002720
002721 TAACAAGCAT CTTCTTAACC AACTTTATGC ACAGTGTATG TTTGTAAGTG CTTCTGCACG AATGTTTATA CATGACTGTT 002800
002801 TCCATAGTAC TTATGTTTTT AAAAATATTC AGTCATTTCC TACTATAATC CTCATGTATC CATGTAACTG ACTCAAAAAT 002880
002881 ACTTCAGCCA CAGAAAGCTA AAACTGAGCA AATCTCATTC TTCTTTTCCA TCCCCTTTGC ATGTGGCTGG CATTTAGTAA 002960
002961 TGATTAATAA TATGGCCAGC TGAATAACAG AGGTTTGAGA CACAATTCTT TCTCAAAGGA GTCAGCTAAG CTGGGTCTAC 003040
003041 TTATGGACAA ACATCTAAAT GTGTGGAAGT ATCTGATATT TGACAATGGT AAATTTCCAC TTAGCTAGCT AGCATTGTCA 003120
003121 GACTTCAATC TCCTCATGGC TCTGGCCGTC CTGTTTTAAG CATGATAATT GTTGGCCACA TCTCACATAG TTCTCATTGA 003200
003201 GTGAGTTCAT AAATAAACAG GGTTTTTTTT TTTTTTTAAA GAGCAGCCAA GCACAAAGTG TGACTTTGTT GACATTTTAT 003280
003281 GTGACTTTGT CATATGTTCC TAACCCCCAA TAAAAGCAAT GTTGCATCAA CTGT
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Predicted Small Protein

Name ENST00000529823.1_smProtein_518:628
Length 37
Molecular weight 4510.4008
Aromaticity 0.111111111111
Instability index 55.4111111111
Isoelectric point 9.57720947266
Runs 6
Runs residual 0.0137917637918
Runs probability 0.0272625566743
Amino acid sequence MLLCRKGHYYYYILMVKEKRREVERAREKLGVMMTD
Secondary structure LEEEELLLEEEEEEEEHHHHHHHHHHHHHHLLLLLL
PRMN -
PiMo -